|
bivalve gut microbiota, water and soil samples What OTU cluster?
|
|
11
|
133
|
January 19, 2026
|
|
Reformat OTU table for use in FUNGuild
|
|
0
|
82
|
December 12, 2025
|
|
low proportion of identified ITS - OTU features
|
|
2
|
109
|
March 28, 2025
|
|
dbotu_q2 plugin issue: appears to install but plugin not found and won't execute
|
|
5
|
163
|
April 17, 2024
|
|
I want to get the mean and median abundance or relative abundance for each bacteria species from OTU tables
|
|
3
|
482
|
December 13, 2023
|
|
Many questions about clustering in the qiime vsearch plugin
|
|
9
|
995
|
December 11, 2023
|
|
Alpha and Beta Diversity Explanations and Commands https://forum.qiime2.org/t/alpha-and-beta-diversity-explanations-and-commands/2282
|
|
4
|
516
|
December 7, 2023
|
|
Converting ASVs from DADA2 to OTUs
|
|
11
|
935
|
October 10, 2023
|
|
OTU vs ASV Analysis
|
|
3
|
920
|
September 12, 2023
|
|
ASV or OTU ? What do I have?
|
|
3
|
605
|
August 31, 2023
|
|
Relative Abundance considering OTU
|
|
7
|
1353
|
August 9, 2023
|
|
How to build an OTU table
|
|
1
|
1466
|
June 27, 2023
|
|
How to know which sequences are included in an OTU?
|
|
5
|
550
|
May 1, 2023
|
|
About OTU clustering of fasta files
|
|
3
|
438
|
April 27, 2023
|
|
issues moving between greengenes classification and diversity metrics
|
|
3
|
413
|
March 30, 2023
|
|
If is normal that the exaggerated different between the numbers of ASV and OTU using the same sequencing data?
|
|
1
|
543
|
January 10, 2023
|
|
Qiime 2 version of Qiime1 "pick_rep_set.py" for picking representative OTU sequences
|
|
3
|
403
|
November 22, 2022
|
|
REsCRIPt dereplication leads to very different result
|
|
3
|
446
|
September 30, 2022
|
|
Why the total number of observed otus does not agree with the total number of otus?
|
|
1
|
328
|
July 26, 2022
|
|
is it realy OTUs table??
|
|
0
|
322
|
June 24, 2022
|
|
otus and greengenes?
|
|
5
|
682
|
June 13, 2022
|
|
Difference between observed feature and OTU from taxa bar plot csv file
|
|
5
|
370
|
May 9, 2022
|
|
observed features vs observed OTUs
|
|
4
|
1227
|
March 17, 2022
|
|
Different OTUs detected using different workflow
|
|
3
|
390
|
July 28, 2021
|
|
Different OTU identifiers between rep-seqs and feature table files
|
|
2
|
806
|
June 17, 2021
|
|
DADA2 with Cutadapt to have OTU table
|
|
4
|
1040
|
June 15, 2021
|
|
QIIME2 vs QIIME1 taxonomy and OTU clustering
|
|
2
|
1229
|
March 24, 2021
|
|
Difficulty with closed reference OTU clustering
|
|
2
|
584
|
March 1, 2021
|
|
BIOM conversion to tsv
|
|
2
|
1085
|
November 3, 2020
|
|
OTU picking with DADA2 input
|
|
2
|
1322
|
August 25, 2020
|
