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bivalve gut microbiota, water and soil samples What OTU cluster?
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11
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89
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January 19, 2026
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Reformat OTU table for use in FUNGuild
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0
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58
|
December 12, 2025
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low proportion of identified ITS - OTU features
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3
|
92
|
April 28, 2025
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dbotu_q2 plugin issue: appears to install but plugin not found and won't execute
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5
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153
|
April 17, 2024
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I want to get the mean and median abundance or relative abundance for each bacteria species from OTU tables
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8
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455
|
January 14, 2024
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Many questions about clustering in the qiime vsearch plugin
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10
|
952
|
January 11, 2024
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Alpha and Beta Diversity Explanations and Commands https://forum.qiime2.org/t/alpha-and-beta-diversity-explanations-and-commands/2282
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9
|
499
|
January 8, 2024
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Converting ASVs from DADA2 to OTUs
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12
|
889
|
November 10, 2023
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OTU vs ASV Analysis
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4
|
877
|
October 13, 2023
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ASV or OTU ? What do I have?
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4
|
553
|
October 2, 2023
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Relative Abundance considering OTU
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9
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1303
|
August 9, 2023
|
|
How to build an OTU table
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2
|
1424
|
July 28, 2023
|
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How to know which sequences are included in an OTU?
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6
|
539
|
June 2, 2023
|
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About OTU clustering of fasta files
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4
|
418
|
May 28, 2023
|
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issues moving between greengenes classification and diversity metrics
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4
|
396
|
April 30, 2023
|
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If is normal that the exaggerated different between the numbers of ASV and OTU using the same sequencing data?
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|
1
|
532
|
January 10, 2023
|
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Qiime 2 version of Qiime1 "pick_rep_set.py" for picking representative OTU sequences
|
|
4
|
386
|
December 23, 2022
|
|
REsCRIPt dereplication leads to very different result
|
|
4
|
437
|
October 31, 2022
|
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Why the total number of observed otus does not agree with the total number of otus?
|
|
1
|
324
|
July 26, 2022
|
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is it realy OTUs table??
|
|
1
|
316
|
July 25, 2022
|
|
otus and greengenes?
|
|
6
|
668
|
July 14, 2022
|
|
Difference between observed feature and OTU from taxa bar plot csv file
|
|
6
|
352
|
June 9, 2022
|
|
observed features vs observed OTUs
|
|
5
|
1202
|
April 17, 2022
|
|
Different OTUs detected using different workflow
|
|
3
|
370
|
July 28, 2021
|
|
Different OTU identifiers between rep-seqs and feature table files
|
|
5
|
799
|
July 18, 2021
|
|
DADA2 with Cutadapt to have OTU table
|
|
5
|
1017
|
July 16, 2021
|
|
QIIME2 vs QIIME1 taxonomy and OTU clustering
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|
3
|
1208
|
April 24, 2021
|
|
Difficulty with closed reference OTU clustering
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|
4
|
581
|
April 1, 2021
|
|
BIOM conversion to tsv
|
|
2
|
1070
|
November 3, 2020
|
|
OTU picking with DADA2 input
|
|
3
|
1303
|
September 25, 2020
|
