Topics tagged feature-classifier

Topic	Replies	Views	Activity
ITS2 classification: identical sequences but different results (DADA2 vs merged) User Support feature-classifier , taxonomy	6	61	April 7, 2026
MIMt database for 16S, 18S, ITS, 23S and 28S new release available (March 26) Community Contributions feature-classifier , taxonomy , its , 16s , ribosomal-database	0	59	March 18, 2026
Annotation and Classifier question User Support feature-classifier	17	106	March 18, 2026
process killed qiime 2024.5 on Ubuntu 24.04.4 LTS when running on multicore Technical Support feature-classifier	2	31	April 12, 2026
Integrating V3-V4 and V4 16S datasets for large-scale meta-analysis: Is Greengenes2 the optimal choice for cross-region alignment? General Discussion dada2 , feature-classifier , taxonomy , greengenes2	1	98	March 6, 2026
QIIME2-amplicon-2025.7 16S PacBio classification issues/discussion Technical Support feature-classifier , taxonomy , classifier	7	97	March 28, 2026
pre-trained UNITE ITS classifiers for QIIME 2026.4 and scikit-learn=1.7.1 Data resources feature-classifier , taxonomy , its , fungi , unite	15	8613	January 20, 2026
The differences in taxonomy output by the feature-classifier trainer and the full-length trainer User Support feature-classifier , taxonomy	7	87	February 18, 2026
"over-classification" of ASV taxonomy? User Support feature-classifier , taxonomy , dereplicate , rescript , naivebayes	3	67	February 10, 2026
How to perform SILVA V3 classifier training? Silva feature-classifier , taxonomy , silva	11	220	January 4, 2026
Troubleshoot classification where all ASVs are unassigned? User Support feature-classifier , taxonomy	8	100	January 2, 2026
Evaluate custom taxonomic classifier with RESCRIPt? User Support feature-classifier , taxonomy , unite , rescript	6	120	December 28, 2025
MIMt database new release!!! QIIME2 classifiers for markers 16S, ITS, 18S, 23S and 28S Other Bioinformatics Tools feature-classifier , taxonomy , ribosomal-database	0	108	November 3, 2025
Feature-clasifier V3-V4 Technical Support feature-classifier	7	145	November 21, 2025
Trained classifier output not found Technical Support dada2 , feature-classifier	7	112	October 13, 2025
Question about consensus taxonomy assignment in classify-consensus-vsearch User Support feature-classifier	9	187	September 23, 2025
Is there a pre-trained QIIME 2 classifier with full-length 16S (.qza)? Ideas and Suggestions feature-classifier	10	231	August 14, 2025
16S SRNA General Discussion feature-classifier , taxonomy , feature-table	1	79	August 2, 2025
Greengenes2 and RESCRIPt User Support feature-classifier , taxonomy , rescript , greengenes2	3	135	August 9, 2025
SILVA 138.1 classifier trained on version 2023.5 and used in 2024.5 User Support feature-classifier , rescript	3	214	August 3, 2025
Dealing with Poor Taxonomic Assignments User Support feature-classifier , taxonomy , rescript	7	137	July 26, 2025
Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt Tutorials feature-classifier , taxonomy , plugin-development , tutorials , rescript	26	64736	June 23, 2025
Request for Pre-trained SILVA V1–V3 Naive Bayes Classifier General Discussion feature-classifier	3	93	July 20, 2025
Shotgun sequencing of Fungi - UNITE or KRAKEN2 General Discussion feature-classifier , taxonomy , its , fungi	1	98	June 11, 2025
SILVA 138.2 classifier Silva feature-classifier , silva	3	345	June 28, 2025
Classifier code is running without a result Technical Support feature-classifier	3	59	June 21, 2025
Classify the phylum of d__Eukaryota;__ User Support feature-classifier , taxonomy , galaxy	7	122	June 21, 2025
Inconsitent taxonomic classification User Support feature-classifier	6	99	June 16, 2025
Greengenes2 2024.09 phylogenetic tree Technical Support feature-classifier , taxonomy	7	296	June 2, 2025
How does the sklearn classifier handle ambiguous bases? General Discussion feature-classifier , naivebayes	3	92	May 28, 2025