|
About the Ideas and Suggestions category
|
|
0
|
1003
|
November 14, 2016
|
|
Filter kraken2 reports (e.g. before creating feature-tables with bracken)
|
|
3
|
87
|
October 8, 2024
|
|
Add FIGARO tool to optimize trimming/truncating parameters in DADA2
|
|
6
|
2406
|
August 26, 2024
|
|
q2-assembly assemble-megahit error:
|
|
5
|
51
|
September 13, 2024
|
|
Installing Qiime on Google Colab
|
|
19
|
3664
|
August 1, 2024
|
|
Output Individual QC Plots as in dada2
|
|
3
|
27
|
July 26, 2024
|
|
q2 moshpit eggnog-annotate: suggestion for multithreading with --p-n-threads
|
|
2
|
49
|
July 26, 2024
|
|
q2_composition da_plot label limit
|
|
8
|
370
|
July 22, 2024
|
|
Modification of demux emp-paired golay-error-correction
|
|
8
|
230
|
July 17, 2024
|
|
converting pacbio
|
|
1
|
93
|
May 13, 2024
|
|
LIME or SHAP in qiime2
|
|
1
|
118
|
April 8, 2024
|
|
Command line interface/tools to explore artifacts directly
|
|
12
|
4222
|
March 25, 2024
|
|
Sliding windows and quality filtering
|
|
2
|
316
|
January 20, 2024
|
|
using a manifest file to import data or just instruct what the forward and reverse file is
|
|
5
|
383
|
October 23, 2023
|
|
Why isn't alpha-rarefaction using more than 1 core?
|
|
2
|
243
|
October 19, 2023
|
|
Updating to adonis2
|
|
7
|
1745
|
October 2, 2023
|
|
Symlink to artifacts
|
|
5
|
270
|
September 18, 2023
|
|
ANCOM-BC in QIIME2?
|
|
9
|
3224
|
August 7, 2023
|
|
How to deal with unassigned taxa
|
|
3
|
762
|
June 23, 2023
|
|
Switch conda to mamba?
|
|
8
|
1637
|
May 23, 2023
|
|
Extending taxonomy info (adding new levels) in BIOM format
|
|
1
|
242
|
April 26, 2023
|
|
misc feedback on qiime2
|
|
1
|
524
|
March 14, 2023
|
|
My seq depth variation after denoising with QIIME2 2022.8 VERSION
|
|
3
|
292
|
December 6, 2022
|
|
Autocompletion of options
|
|
1
|
311
|
November 29, 2022
|
|
Diversity indices
|
|
1
|
710
|
November 9, 2022
|
|
Bray-Curtis citation
|
|
1
|
843
|
September 16, 2022
|
|
vsearch de novo output --uc option
|
|
20
|
3156
|
August 16, 2022
|
|
Can I annotate specific ASVs in taxa-bar-plots ?
|
|
2
|
461
|
May 6, 2022
|
|
q2book: additional ideas and suggestions
|
|
1
|
437
|
February 22, 2022
|
|
Customized file naming convention for qiime tools export
|
|
2
|
1650
|
March 14, 2022
|