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16S Sequencing for Species-Level Resolution
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5
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187
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September 8, 2026
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Bug in new SILVA 144 taxmap file
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6
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185
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September 3, 2026
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pre-trained UNITE ITS classifiers for QIIME 2026.7 and scikit-learn=1.7.1
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15
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9351
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August 31, 2026
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extract-seq-segments: number of reads vs accuracy of reads.
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3
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62
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August 19, 2026
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Using RESCRIPt's 'extract-seq-segments' to extract reference sequences without PCR primer pairs.
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5
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6781
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November 14, 2023
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Train a taxonomy classifier by extracting an amplicon region from a curated sequence alignment (using SILVA as an example).
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0
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103
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August 12, 2026
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RESCRIPt-evaluate
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0
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92
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July 27, 2026
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Naive Bayes classifier trained on a custom NCBI RefSeq V3-V4 database classifies almost all ASVs as same species
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1
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79
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July 15, 2026
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DeepTaxa, a QIIME 2 plugin for 16S taxonomy
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1
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175
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July 2, 2026
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ITS Classifier: Extract reference reads - HiSeq:
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2
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86
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May 31, 2026
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Merging NGS with TGS?
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3
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73
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May 20, 2026
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Data analysis from Oxford Nanopore
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1
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81
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May 19, 2026
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ITS2 classification: identical sequences but different results (DADA2 vs merged)
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6
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140
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April 7, 2026
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MIMt database for 16S, 18S, ITS, 23S and 28S new release available (March 26)
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0
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134
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March 18, 2026
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Integrating V3-V4 and V4 16S datasets for large-scale meta-analysis: Is Greengenes2 the optimal choice for cross-region alignment?
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1
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184
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March 6, 2026
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QIIME2-amplicon-2025.7 16S PacBio classification issues/discussion
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6
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171
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February 24, 2026
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Best practice to identify mitochondria and chloroplasts using Greengenes2 2024.09
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2
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126
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February 4, 2026
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No "Unclassified" etc taxa detected with grep in multiple unfiltered UNITE dbs?
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1
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67
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January 19, 2026
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The differences in taxonomy output by the feature-classifier trainer and the full-length trainer
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6
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143
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January 18, 2026
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"over-classification" of ASV taxonomy?
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2
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104
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January 9, 2026
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guidance using quality-control evaluate-taxonomy and evaluate-composition
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8
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190
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December 19, 2025
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Reformat OTU table for use in FUNGuild
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0
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94
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December 12, 2025
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How to perform SILVA V3 classifier training?
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9
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304
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November 17, 2025
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Troubleshoot classification where all ASVs are unassigned?
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7
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162
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December 2, 2025
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Issue with UNITE classifier for ITS1
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1
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95
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December 2, 2025
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Evaluate custom taxonomic classifier with RESCRIPt?
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5
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194
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November 27, 2025
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Exciting News: New QIIME 2 Tutorial on Arbuscular Mycorrhizal Fungi (AMF) Analysis Now Available!
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0
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176
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November 4, 2025
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MIMt database new release!!! QIIME2 classifiers for markers 16S, ITS, 18S, 23S and 28S
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0
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138
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November 3, 2025
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confidence filtering pre or post classifier?
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3
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119
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October 30, 2025
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Train PR2 Classifier
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3
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338
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October 20, 2025
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