|
Exciting News: New QIIME 2 Tutorial on Arbuscular Mycorrhizal Fungi (AMF) Analysis Now Available!
|
|
0
|
42
|
November 4, 2025
|
|
MIMt database new release!!! QIIME2 classifiers for markers 16S, ITS, 18S, 23S and 28S
|
|
0
|
46
|
November 3, 2025
|
|
confidence filtering pre or post classifier?
|
|
3
|
45
|
October 30, 2025
|
|
Train PR2 Classifier
|
|
3
|
87
|
October 20, 2025
|
|
Error when collapsing at genus level: Feature IDs missing from taxonomy
|
|
4
|
32
|
October 26, 2025
|
|
Importing Taxonomy into Qiime2
|
|
8
|
86
|
October 19, 2025
|
|
ABI reads with Ns: OTUs & classification
|
|
4
|
56
|
October 14, 2025
|
|
How to account for uneven sampling
|
|
2
|
54
|
August 9, 2025
|
|
16S SRNA
|
|
1
|
58
|
August 2, 2025
|
|
Merging qiime2 sample metadata with exterior taxonomic classifications
|
|
1
|
32
|
July 13, 2025
|
|
Analysis of 16S data from different regions using q2-fragment-insertion or other substitution
|
|
3
|
36
|
August 10, 2025
|
|
Greengenes2 and RESCRIPt
|
|
3
|
99
|
August 9, 2025
|
|
PICRUST2 Input Data setting
|
|
1
|
48
|
July 8, 2025
|
|
Dealing with Poor Taxonomic Assignments
|
|
7
|
91
|
July 26, 2025
|
|
Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt
|
|
26
|
62371
|
June 23, 2025
|
|
classify-sklearn vs classify-consensus-vsearch - classification depth
|
|
2
|
78
|
June 13, 2025
|
|
Shotgun sequencing of Fungi - UNITE or KRAKEN2
|
|
1
|
52
|
June 11, 2025
|
|
Minimum length of read in ASV (DADA2)
|
|
6
|
95
|
July 9, 2025
|
|
Difficulty assigning taxonomy to cyanobacterial ASVs
|
|
2
|
59
|
June 5, 2025
|
|
Classify the phylum of d__Eukaryota;__
|
|
7
|
90
|
June 21, 2025
|
|
mismatch between taxonomy and sequence data that download from NCBI using qiime rescript get-ncbi-data
|
|
4
|
32
|
June 19, 2025
|
|
pre-trained UNITE ITS classifiers for QIIME 2024.10 (and older!)
|
|
12
|
7748
|
May 9, 2025
|
|
how to select samples using stacked barplot
|
|
2
|
37
|
May 7, 2025
|
|
RESCRIPt GTDB 226.0
|
|
3
|
90
|
June 6, 2025
|
|
Greengenes2 2024.09 phylogenetic tree
|
|
7
|
169
|
June 2, 2025
|
|
Almost all Reads are unclassified - custom 18S V4 classifier
|
|
13
|
177
|
May 26, 2025
|
|
SILVA 138.2 genus names with strain code
|
|
3
|
91
|
April 24, 2025
|
|
taxonomy mitochondria vs D_4__Mitochondria
|
|
2
|
32
|
April 22, 2025
|
|
QIIME 2 Meta-Analysis of Rhizosphere Microbiome with Mixed V3-V4/V4 Data: Best Practices for Downstream Analysis
|
|
14
|
369
|
May 18, 2025
|
|
Rescript get-ncbi-data MemoryError
|
|
6
|
54
|
May 14, 2025
|