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confidence filtering pre or post classifier?
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2
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18
|
October 24, 2025
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Train PR2 Classifier
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3
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49
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October 20, 2025
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Error when collapsing at genus level: Feature IDs missing from taxonomy
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4
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27
|
October 26, 2025
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Importing Taxonomy into Qiime2
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8
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80
|
October 19, 2025
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ABI reads with Ns: OTUs & classification
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4
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41
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October 14, 2025
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How to account for uneven sampling
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2
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53
|
August 9, 2025
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16S SRNA
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1
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52
|
August 2, 2025
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Merging qiime2 sample metadata with exterior taxonomic classifications
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1
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25
|
July 13, 2025
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Analysis of 16S data from different regions using q2-fragment-insertion or other substitution
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3
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32
|
August 10, 2025
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Greengenes2 and RESCRIPt
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3
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92
|
August 9, 2025
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PICRUST2 Input Data setting
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1
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43
|
July 8, 2025
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Dealing with Poor Taxonomic Assignments
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7
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81
|
July 26, 2025
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Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt
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26
|
62088
|
June 23, 2025
|
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classify-sklearn vs classify-consensus-vsearch - classification depth
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2
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73
|
June 13, 2025
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Shotgun sequencing of Fungi - UNITE or KRAKEN2
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1
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38
|
June 11, 2025
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Minimum length of read in ASV (DADA2)
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6
|
90
|
July 9, 2025
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Difficulty assigning taxonomy to cyanobacterial ASVs
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2
|
55
|
June 5, 2025
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Classify the phylum of d__Eukaryota;__
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7
|
86
|
June 21, 2025
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mismatch between taxonomy and sequence data that download from NCBI using qiime rescript get-ncbi-data
|
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4
|
27
|
June 19, 2025
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pre-trained UNITE ITS classifiers for QIIME 2024.10 (and older!)
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12
|
7653
|
May 9, 2025
|
|
how to select samples using stacked barplot
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2
|
32
|
May 7, 2025
|
|
RESCRIPt GTDB 226.0
|
|
3
|
84
|
June 6, 2025
|
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Greengenes2 2024.09 phylogenetic tree
|
|
7
|
160
|
June 2, 2025
|
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Almost all Reads are unclassified - custom 18S V4 classifier
|
|
13
|
172
|
May 26, 2025
|
|
SILVA 138.2 genus names with strain code
|
|
3
|
75
|
April 24, 2025
|
|
taxonomy mitochondria vs D_4__Mitochondria
|
|
2
|
31
|
April 22, 2025
|
|
QIIME 2 Meta-Analysis of Rhizosphere Microbiome with Mixed V3-V4/V4 Data: Best Practices for Downstream Analysis
|
|
14
|
356
|
May 18, 2025
|
|
Rescript get-ncbi-data MemoryError
|
|
6
|
50
|
May 14, 2025
|
|
biom add-metadata: Error in biom file while adding Taxonomy
|
|
4
|
29
|
May 8, 2025
|
|
alpha and beta diversity
|
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2
|
52
|
April 6, 2025
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