Train PR2 Classifier
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2
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15
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October 1, 2025
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Error when collapsing at genus level: Feature IDs missing from taxonomy
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3
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25
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September 24, 2025
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Importing Taxonomy into Qiime2
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7
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68
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September 18, 2025
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ABI reads with Ns: OTUs & classification
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3
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31
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September 13, 2025
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How to account for uneven sampling
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2
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52
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August 9, 2025
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16S SRNA
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1
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44
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August 2, 2025
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Merging qiime2 sample metadata with exterior taxonomic classifications
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1
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24
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July 13, 2025
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Analysis of 16S data from different regions using q2-fragment-insertion or other substitution
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3
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31
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August 10, 2025
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Greengenes2 and RESCRIPt
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3
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85
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August 9, 2025
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PICRUST2 Input Data setting
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1
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40
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July 8, 2025
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Dealing with Poor Taxonomic Assignments
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7
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80
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July 26, 2025
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Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt
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26
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61662
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June 23, 2025
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classify-sklearn vs classify-consensus-vsearch - classification depth
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2
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64
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June 13, 2025
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Shotgun sequencing of Fungi - UNITE or KRAKEN2
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1
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34
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June 11, 2025
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Minimum length of read in ASV (DADA2)
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6
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85
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July 9, 2025
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Difficulty assigning taxonomy to cyanobacterial ASVs
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2
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53
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June 5, 2025
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Classify the phylum of d__Eukaryota;__
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7
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83
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June 21, 2025
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mismatch between taxonomy and sequence data that download from NCBI using qiime rescript get-ncbi-data
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4
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25
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June 19, 2025
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pre-trained UNITE ITS classifiers for QIIME 2024.10 (and older!)
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12
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7539
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May 9, 2025
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how to select samples using stacked barplot
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2
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32
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May 7, 2025
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RESCRIPt GTDB 226.0
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3
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82
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June 6, 2025
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Greengenes2 2024.09 phylogenetic tree
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7
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150
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June 2, 2025
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Almost all Reads are unclassified - custom 18S V4 classifier
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13
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169
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May 26, 2025
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SILVA 138.2 genus names with strain code
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3
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73
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April 24, 2025
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taxonomy mitochondria vs D_4__Mitochondria
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2
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30
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April 22, 2025
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QIIME 2 Meta-Analysis of Rhizosphere Microbiome with Mixed V3-V4/V4 Data: Best Practices for Downstream Analysis
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14
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341
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May 18, 2025
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Rescript get-ncbi-data MemoryError
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6
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49
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May 14, 2025
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biom add-metadata: Error in biom file while adding Taxonomy
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4
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28
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May 8, 2025
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alpha and beta diversity
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2
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48
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April 6, 2025
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Specific taxa abundance
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5
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59
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May 3, 2025
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