Topics tagged taxonomy

Topic	Replies	Views	Activity
Has anyone used chloroplast "contaminants" to do host phylogeography? General Discussion taxonomy	6	49	January 23, 2021
Taxonomy classification results are totally different from two analysis method User Support feature-classifier , taxonomy	4	39	January 22, 2021
Please help me fix plugin error while making 16S taxonomy .qzv file Technical Support taxonomy	4	33	January 22, 2021
Display taxa bar plots by group instead of sample-id User Support taxonomy	8	87	January 20, 2021
Make 12S reference database using Rescript Community Plugin Support taxonomy , import	4	54	January 17, 2021
Biom export option that appends taxonomic assignments to the feature table Ideas and Suggestions taxonomy , biom , export	7	1535	January 20, 2021
Creating a V3 classifier killed. Technical Support rescript , taxonomy , feature-classifier	9	59	January 12, 2021
18S data Taxonomic classifiers User Support taxonomy , feature-classifier	9	77	January 8, 2021
How to fix generated taxonomy when 16s fastq was add a new sample and reprocessed？ Other Bioinformatics Tools feature-classifier , taxonomy	5	50	January 5, 2021
Attaining a taxonomy tree for RDP denovo picked OTUs (MicrobiomeHD) Other Bioinformatics Tools taxonomy	2	31	January 4, 2021
classification of non-overlapping reads treated with justConcatenate User Support merging , taxonomy , feature-classifier	7	80	January 2, 2021
How to compare taxonomy from a single sample against different groups General Discussion ancom , taxonomy	5	114	December 22, 2020
./silva-132-99-nb-classifier.qza' is not a QIIME 2 Artifact (.qza) Technical Support feature-classifier , taxonomy	5	60	January 22, 2021
Import custom taxonomy Technical Support taxonomy , import	8	59	January 17, 2021
Problem with Biom add metadata Other Bioinformatics Tools feature-table , taxonomy , import	3	60	January 14, 2021
Using RESCRIPt to compile sequence databases and taxonomy classifiers from NCBI Genbank Tutorials taxonomy , rescript	7	843	December 15, 2020
weird taxanomic annotations General Discussion taxonomy	2	80	November 24, 2020
Species classification error Technical Support taxonomy	3	43	January 10, 2021
How to build a classifier from a Fungene database User Support taxonomy	3	54	January 9, 2021
Replace missing taxonomic ranks General Discussion taxa , barplot , taxonomy	4	49	December 4, 2020
A question about meta-analysis using qiime2-DADA2 or qiime1-closed OTU User Support feature-table , dada2 , demux , taxonomy	12	148	January 2, 2021
Low number of ASVs identified per sample User Support feature-classifier , taxonomy	7	131	January 1, 2021
Unassigne taxonomy issue User Support feature-table , feature-classifier , dada2 , taxonomy , demux	5	94	December 26, 2020
error message: (1/1) Invalid value for '--i-classifier': 'gg-13-8-99-515-806-nb- classifier.qza' is not a QIIME 2 Artifact (.qza) User Support taxonomy	5	84	December 25, 2020
Taxonomic classification with the greengenes database User Support taxonomy	4	108	December 24, 2020
Training classifier with own reference database error Invalid value for '--i-reference-taxonomy': 'ref-taxonomy.gza' is not a valid filepath Technical Support feature-classifier , taxonomy	8	99	December 21, 2020
Taxonomy barplot appear empty Technical Support taxonomy	5	62	December 6, 2020
Adjustment for sequencing depth vs. Rarefaction General Discussion taxonomy	3	76	November 5, 2020
Relative_Ancom_analysis User Support ancom , taxonomy	12	142	December 4, 2020
How are these feature ids different? General Discussion taxonomy	5	152	October 28, 2020