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ITSxpress performance in different ITS1 amplicons
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|
7
|
180
|
May 2, 2024
|
|
Some issue about itsxpress2 plugin in QIIME2-202309
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5
|
235
|
December 11, 2023
|
|
Plugin error from itsxpress:
|
|
3
|
207
|
December 9, 2023
|
|
Error: QIIME 2 has no plugin/command named 'itsxpress'. Did you mean 'q2-itsxpress'?
|
|
11
|
401
|
October 16, 2023
|
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ITS itsxpress trim-unmerged encounters problems
|
|
2
|
250
|
October 14, 2023
|
|
ITSxpress 2.0 in Qiime2023.2 with EMP data
|
|
18
|
697
|
September 11, 2023
|
|
Plugin error from itsxpress: Missing sequence for record beginning on line 5
|
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3
|
327
|
August 11, 2023
|
|
Not sure how to interpret this q2-itsxpress plugin error
|
|
6
|
685
|
June 20, 2023
|
|
ITS Plugin error from itsxpress
|
|
1
|
252
|
March 23, 2023
|
|
Too many reads lost in ITSxpress
|
|
4
|
442
|
March 18, 2023
|
|
hmmsearch (HMMER) failure during q2-itsxpress run
|
|
8
|
761
|
February 1, 2023
|
|
ITSxpress returned non-zero exit status 1
|
|
3
|
3659
|
March 3, 2023
|
|
Too many reads lost in ITSxpress trimming
|
|
1
|
250
|
January 9, 2023
|
|
Do i need to remove the primer sequences (cutadapt) before using ItSxpress for Fungal ITS data or the hmm matching and trimming can handle that for me?
|
|
1
|
267
|
December 8, 2022
|
|
ITS extraction after joining paired-end reads?
|
|
2
|
510
|
October 13, 2022
|
|
qiime itsxpress File too small
|
|
3
|
272
|
October 11, 2022
|
|
itsxpress - not fastq.gz format error
|
|
21
|
883
|
October 6, 2022
|
|
ITSxpress error: Missing sequence for record beginning on line ...
|
|
3
|
501
|
September 9, 2022
|
|
Error importing with q2-itsxpress
|
|
8
|
515
|
August 29, 2022
|
|
trimmed_exact.qza in ITSxpress
|
|
1
|
445
|
April 8, 2022
|
|
ITSexpress and ITS data upstream analysis
|
|
3
|
851
|
April 17, 2022
|
|
ITSxpress vsearch error q2-2021.11
|
|
4
|
536
|
February 23, 2022
|
|
qiime itsxpress trim-pair-output-unmerged removes all reads
|
|
0
|
515
|
November 23, 2021
|
|
ITS samples sequenced on a NovaSeq machine
|
|
3
|
480
|
November 18, 2021
|
|
q2-itsxpress: UnsatisfiableError
|
|
0
|
583
|
November 15, 2021
|
|
ITS 1 and 2 Analysis
|
|
3
|
855
|
July 25, 2021
|
|
Error importing Ion Torrent SingleEndFastqPhred33V2 Data
|
|
2
|
427
|
May 16, 2021
|
|
Taxonomic assignment with UNITE database: most reads classified as "s__unidentified"
|
|
9
|
3085
|
April 10, 2021
|
|
BUG: q2-itsxpress's dependency BBmap cannot handle PacBio CCS
|
|
5
|
880
|
January 21, 2021
|
|
q2-itsxpress error
|
|
7
|
986
|
November 17, 2020
|
