Library Support

PICRUSt2 This category is a support forum for the q2-picrust2 plugin. Support is primarily provided by @Robyn_Wright. q2-fmt This category is a support forum for the q2-fmt plugin. Support is primarily provided by @cherman2. Silva A space for questions and support related to the Silva online resource for quality checked and aligned ribosomal RNA sequence data. This category is moderated with assistance from @silva-team. ITSxpress

Topic	Replies	Views	Activity
About the Library Support category Library Support	0	1300	November 14, 2018
Gemelli output interpretation Library Support deicode , gemelli	4	817	December 6, 2025
Interpretation of % of variance explained in Gemelli rPCA (summing to 100%?) Library Support gemelli	0	14	December 5, 2025
How to perform SILVA V3 classifier training? Silva feature-classifier , taxonomy , silva	10	84	December 4, 2025
Can silva database be used in protist taxonomic assignment? Silva	2	19	December 4, 2025
ITSxpress Plugin error: "Missing sequence for record beginning on line 9" Library Support q2-itsxpress	7	23	November 28, 2025
Metnet plugin downstream analysis and files produced Library Support q2-metnet	4	71	November 26, 2025
q2-boots and multiple metrics Library Support q2-boots	2	31	November 20, 2025
q2 longitudinal linear mixed effects model random effects Library Support	2	42	September 22, 2025
please help creating human-stool-weighted for v3v4 silva (q2-clawback) Library Support clawback	1	39	September 15, 2025
q2fmt distance to baseline metric q2-fmt fmt	2	42	September 5, 2025
Alternative Metabolomic Plugins Library Support picrust	3	55	August 14, 2025
Picrust2 q2-amplicon-2025.4 installation error PICRUSt2 picrust	3	117	September 8, 2025
Sidle for multiple partly overlapping regions? Library Support sidle	12	603	July 8, 2025
Greengenes2 vs. SILVA Silva silva , greengenes2	0	93	July 3, 2025
q2 boots error "diagonal can only contain zeros" Library Support	6	45	June 26, 2025
Using q2-boots as upstream input for q2-fmt q2-fmt	5	72	June 25, 2025
Error running qiime longitudinal linear-mixed-effects Library Support longitudinal	2	44	June 23, 2025
Metacyc pathways after PICRUST2 PICRUSt2	2	141	June 9, 2025
Difficulty assigning taxonomy to cyanobacterial ASVs Silva taxonomy , greengenes , silva , ncbi	2	68	June 5, 2025
q2-fmt beta version installation q2-fmt fmt	2	55	June 2, 2025
SILVA 138.2 classifier Silva feature-classifier , silva	3	243	June 28, 2025
q2-sidle error: exceeds max_bin_len Library Support sidle	1	24	May 13, 2025
Primer sequences still present in representative-sequences after running ITSxpress Library Support q2-itsxpress	1	35	May 7, 2025
Using a GNEISS equivalent in 2024.10 Library Support gneiss	2	75	April 22, 2025
Question about DADA2 filtering and chimera detection Library Support	5	99	March 27, 2025
"Missing sequence for record" ITSxpress	6	103	March 20, 2025
SILVA vs PR2 database using qiime2 Silva feature-classifier , taxonomy , silva , 18s	1	191	March 19, 2025
Comparison of OTU Identifications with Silva 138.1 and Greengenes 2022.10 databases Silva feature-classifier , greengenes , silva	7	202	March 16, 2025
What happened to Qurro and Songbird? Library Support qurro	2	139	March 13, 2025