|
Functional annotation using Greengenes2
|
|
5
|
83
|
July 2, 2026
|
|
DeepTaxa, a QIIME 2 plugin for 16S taxonomy
|
|
1
|
86
|
July 2, 2026
|
|
Greengenes2 unclassified reads resolved by degenerate base change (H→N) in cutadapt 806R primer — why would this affect classification but not rep-seq statistics?
|
|
2
|
78
|
April 8, 2026
|
|
Integrating V3-V4 and V4 16S datasets for large-scale meta-analysis: Is Greengenes2 the optimal choice for cross-region alignment?
|
|
1
|
134
|
March 6, 2026
|
|
Difficulty with Greengenes2 2022.10
|
|
11
|
163
|
January 29, 2026
|
|
Comparing 16S and shotgun metagenomic data with greengenes2
|
|
3
|
181
|
January 20, 2026
|
|
Greengenes2 and RESCRIPt
|
|
2
|
147
|
July 9, 2025
|
|
Greengenes2 vs. SILVA
|
|
0
|
210
|
July 3, 2025
|
|
train a sequence classifier on your own data
|
|
2
|
94
|
June 27, 2025
|
|
GG2 with V4-V5 primers 515FB-926R vs 2021 Silva
|
|
1
|
107
|
June 6, 2025
|
|
Why do we get higher species level assignment with an older GTDB classifier than with a more recent one?
|
|
8
|
297
|
March 27, 2025
|
|
Missing species sequence on Greengenes2 2024.09
|
|
2
|
84
|
March 18, 2025
|
|
Am I overthinking this? Dada2 and Greengenes2
|
|
5
|
148
|
March 17, 2025
|
|
Issue with Taxonomic Classification Greengene2 for 16S V4 region - Unassigned data
|
|
5
|
303
|
March 17, 2025
|
|
Greengenes 2022.10 phylogeny files
|
|
1
|
134
|
March 3, 2025
|
|
Greengenes2 2024.09
|
|
0
|
4497
|
October 8, 2024
|
|
Linking Greengenes2 to another feature table
|
|
5
|
138
|
January 14, 2025
|
|
Introducing Greengenes2 2022.10
|
|
71
|
31624
|
October 11, 2024
|
|
Trim sequences before using Greengenes2 database?
|
|
1
|
66
|
December 17, 2024
|
|
gg-13-8-99-515-806-nb-classifier.qza is not up-to-date
|
|
8
|
478
|
December 13, 2024
|
|
Chloroplast in Greegnenes 2 2022.10
|
|
3
|
101
|
December 9, 2024
|
|
Greengenes 2 with 515F-926R primers
|
|
1
|
101
|
November 13, 2024
|
|
Classifier confidence of 1 for all features
|
|
3
|
95
|
December 2, 2024
|
|
Arbitrary ASV fragment placement in Greengenes2
|
|
0
|
153
|
September 6, 2024
|
|
Unclassified at the phylum level
|
|
5
|
300
|
September 4, 2024
|
|
Best Discussion Forum for Greengenes 2?
|
|
7
|
216
|
August 28, 2024
|
|
Database With Best Accuracy at Genus Level for Human Microbiome?
|
|
8
|
350
|
August 28, 2024
|
|
Sequence and taxonomy file for GG2
|
|
8
|
242
|
June 15, 2024
|
|
Greengenes 2 confidence threshold
|
|
4
|
237
|
June 13, 2024
|
|
Weird letters and numbers after taxa ID - f__Bacillaceae_H_294103
|
|
6
|
270
|
May 29, 2024
|
