Latest General Discussion topics

Topic	Replies	Views	Activity
Frequent Questions and "Best of the QIIME 2 Forum" best-of-the-forum The following is a list of frequently asked questions on the forum, with answers, to serve as a point of reference for forum users to quickly find answers, or for forum users and moderators to use as a reference when hel…	2	7141	February 27, 2020
About the General Discussion category	1	970	March 13, 2023
Issue with SILVA 138.2 and RESCRIPt Compatibility taxonomy	2	3	September 12, 2024
Qiime2 metagenome october 2024 update	3	33	September 12, 2024
Seperating 16S, 18S, ITS, COI and chloroplast sequences	3	7	September 12, 2024
Nanopore Long Read Demultiplexed Full 16S rRNA Seq queued	6	25	September 12, 2024
Is there a way to use files from Nanopore in Qiime2 ? dada2 , queued , nanopore	5	1149	September 11, 2024
Arbitrary ASV fragment placement in Greengenes2 greengenes2	0	17	September 6, 2024
Create an ASV table using fasta sequences	11	55	September 6, 2024
Unclassified at the phylum level feature-classifier , taxonomy , greengenes2	5	64	September 4, 2024
What laptop does qiime2 run on	3	34	September 2, 2024
Manually Adding Positive Controls to classifier or reference database taxonomy , feature-table , rescript	4	483	August 30, 2024
Associate changes in taxa relative abundances (for all taxa) with calculated changes of continuous metadata variables longitudinal	5	47	August 29, 2024
Best Discussion Forum for Greengenes 2? greengenes , ribosomal-database , greengenes2	7	101	August 28, 2024
Database With Best Accuracy at Genus Level for Human Microbiome? greengenes , ncbi , rdp , greengenes2	8	87	August 28, 2024
Reconciling 16s Databases in a Single Pipeline greengenes , silva , 16s , ncbi , rdp	5	49	August 28, 2024
How to choose between full-length Greengenes or SILVA for 16s rRNA V1-V2 analysis with qiime2 pipeline?	1	27	August 27, 2024
Specificity and Sensitivity at Different Abundances? taxonomy , 16s , sequences	3	37	August 24, 2024
Alpha Diversity q2-longitudinal question	2	32	August 23, 2024
analysing Eukaryota sequences	2	17	August 22, 2024
Handling Non-Merging Paired-End 803f-1392r Amplicon Sequences in QIIME 2 for ASV Generation dada2	7	31	August 21, 2024
Which fungal marker use to quantify fungal population via qPCR?	4	24	August 21, 2024
How to Analyze Microbiome Data from Human-Impacted Island Ecosystem	1	23	August 20, 2024
Missing taxa using Unite classifier for ITS2	9	23	August 16, 2024
Concatenate R1 and R2 for reads that can't join	9	979	August 7, 2024
NovaSeq and Dada2 incompatibility. dada2 , tutorial , best-of-the-forum	10	2120	August 6, 2024
Amplicon sequencing on NextSeq 600 cycle kits	4	164	August 6, 2024
Merging sample sets with drastically different frequencies	1	15	August 1, 2024
Determine if a microbial community is predictive of another	2	39	July 30, 2024
Database for ITS2	6	29	July 28, 2024

Frequent Questions and "Best of the QIIME 2 Forum"

best-of-the-forum

The following is a list of frequently asked questions on the forum, with answers, to serve as a point of reference for forum users to quickly find answers, or for forum users and moderators to use as a reference when hel…