Latest General Discussion topics

Topic	Replies	Views	Activity
Frequent Questions and "Best of the QIIME 2 Forum" best-of-the-forum The following is a list of frequently asked questions on the forum, with answers, to serve as a point of reference for forum users to quickly find answers, or for forum users and moderators to use as a reference when hel…	2	7475	February 27, 2020
About the General Discussion category	1	972	March 13, 2023
tutorial for merging different sequencing data in qiime2 dada2	5	26	February 21, 2025
Recommended timepoints for soil microbiome studies?	5	35	February 19, 2025
Code Review: Custom QIIME 2	4	33	February 19, 2025
Can MiSeq Reagent Kit v2 (500 cycles) be used to sequence V3-V4 region of bacterial 16S rRNA gene?	4	33	February 19, 2025
choosing of sampling depth dada2	3	31	February 18, 2025
How to deal with multiple runs for one sample?	8	28	February 18, 2025
Nanopore Long Read Demultiplexed Full 16S rRNA Seq	8	408	February 17, 2025
OTU Tables Relative Frequency to Relative Abundance feature-table , relative-frequency	7	27	February 16, 2025
Issue with Taxonomy Assignment Using Kraken and Custom Database (BOLD, Nemabiome) in QIIME2 metagenomics	4	46	February 14, 2025
Testing ITS1 Pipeline: Finding mock communities or correcting ITSxpress error q2-itsxpress	5	31	February 13, 2025
Uneven sample size, a need for rarefaction tool rarefaction	9	72	February 11, 2025
Analysing merged sequences	3	32	February 9, 2025
non-fungal sequences in ITS2 analyses	3	45	February 8, 2025
Unnasigned ASVs at lower taxonomic ranks can alter metrics of alpha and beta diversity that use the phylogenetical distance?	2	25	January 30, 2025
High presence of chloroplasts in V3-V4 16S rRNA amplification	1	30	January 27, 2025
loosing reads after dada2 filteration	7	39	January 25, 2025
Guidance on Merging and Handling Samples from Multiple Sequencing Runs	3	52	January 22, 2025
da-barplot-ancombc into inkscape	1	22	January 22, 2025
Step by step metabarcoding in fungi	3	28	February 20, 2025
fastqc or similar tool to analyze and compile sequencing data quality fastqc	3	23	January 16, 2025
Database for soil metagenomic 16S: Phytopathogenic? taxonomy	0	24	January 14, 2025
Venn Diagram Creation	1	21	January 9, 2025
Long read 16S amplicon Oxford Nanopore data nanopore	2	161	December 21, 2024
Composition-aware correlation of ASVs from 2 different amplicons correlation , asv	3	24	December 20, 2024
choice of fungal primers its	15	5171	December 9, 2024
Not able to find E. coli in my taxonomy file taxonomy , feature-table , silva	3	35	December 5, 2024
Using ITSxpres with rescript and fit-classifier-naive-bayes	1	19	December 4, 2024
Collapse frequencies by relative abundance per sample	4	26	December 2, 2024

Frequent Questions and "Best of the QIIME 2 Forum"

best-of-the-forum

The following is a list of frequently asked questions on the forum, with answers, to serve as a point of reference for forum users to quickly find answers, or for forum users and moderators to use as a reference when hel…