Latest General Discussion topics

Topic	Replies	Views	Activity
Frequent Questions and "Best of the QIIME 2 Forum" best-of-the-forum The following is a list of frequently asked questions on the forum, with answers, to serve as a point of reference for forum users to quickly find answers, or for forum users and moderators to use as a reference when hel…	2	6223	February 27, 2020
About the General Discussion category	1	915	March 13, 2023
The concept of co-occurrence network structure queued , network , correlation	2	38	April 23, 2024
Patterns in merging using DADA2 dada2 , merge	5	75	April 23, 2024
16s rRNA sequencing for V-3-V4 hyper variable region?	9	1062	April 23, 2024
Species Level Assignments with SILVA	2	56	April 23, 2024
Combining taxonomy from different classifiers to eliminate unidentified sequences? [newbie question] feature-classifier , taxonomy , classifier	1	35	April 23, 2024
Primer show up again after removal using cutadapt in qiime2 DADA2 dada2 , queued , cutadapt	10	71	April 23, 2024
Is the q2galaxy graphical interface	1	34	April 22, 2024
16S full length nanopore to ASVs (new approach?) asv , nanopore , sequences	6	61	April 18, 2024
Concatenate R1 and R2 for reads that can't join	7	773	April 17, 2024
Does presence of samples with high microbial load affect samples with low microbial load in a 16S run?	1	73	April 15, 2024
Can we use extracted reference reads to calculate expected amplicon sizes? best-of-the-forum	7	2163	April 15, 2024
Amplicon sequencing on NextSeq 600 cycle kits	1	56	April 15, 2024
New taxonomy names in old classifier feature-classifier , taxonomy	2	62	April 12, 2024
Filter ASV by frequency	1	61	April 11, 2024
Different Sequencing Data -> Different Quality dada2	3	48	April 10, 2024
Geneious a qiime2 import	2	80	April 9, 2024
importing sequences fro different sequencing run together	1	58	April 3, 2024
Normalization method for alpha diversity	7	140	March 30, 2024
Suggestions to speed up phylogenic tree construction?	11	148	March 29, 2024
Is it possible to have overlaping points in both Jaccard and Bray-Curtis but those points be spaced far apart in Unifrac	4	78	March 28, 2024
Full length 18S primers	1	100	March 22, 2024
multiple sequences assigned to same organism, copy number issue or best guess?	4	134	March 21, 2024
Annotation Challenges with COI Amplicon Analysis in QIIME2 taxonomy	3	135	March 20, 2024
Which quality control method should I choose?	7	145	March 15, 2024
Greengenes2 and q2-clawback taxonomy	4	130	March 14, 2024
Dada2 Parameters choice dada2	9	148	March 13, 2024
Quality control for shotgun metagenomics quality-control	4	151	March 14, 2024
How to unifying the alternative names for different taxonomy databases (e.g. Acidobacteriota vs. Acidobacteria in SILVA vs. GreenGenes) taxonomy	3	141	March 12, 2024

Frequent Questions and "Best of the QIIME 2 Forum"

best-of-the-forum

The following is a list of frequently asked questions on the forum, with answers, to serve as a point of reference for forum users to quickly find answers, or for forum users and moderators to use as a reference when hel…