Latest General Discussion topics

Topic	Replies	Views	Activity
Frequent Questions and "Best of the QIIME 2 Forum" best-of-the-forum The following is a list of frequently asked questions on the forum, with answers, to serve as a point of reference for forum users to quickly find answers, or for forum users and moderators to use as a reference when hel…	2	4651	February 27, 2020
About the General Discussion category	1	640	March 13, 2023
Demultiplexing a dataset	1	22	May 28, 2023
What is g__Anaerotignum_189163 and g__Clostridium_Q_135822	1	29	May 25, 2023
Do you have to publish your whole analysis?	5	83	May 18, 2023
Before I get into CLR transformation, is there any step to change my OTU table ? feature-table , normalization	8	185	May 18, 2023
Understanding options for assigning taxonomy feature-classifier , taxonomy , silva	2	76	May 16, 2023
PCoA results differ between r and QIIME even when using QIIME-produced matrix	2	45	May 16, 2023
Beta diversity signicant differences but not in alpha-diversity	8	516	May 16, 2023
Creation of sample metadata file	1	39	May 16, 2023
Visualizing phylogenetic trees phylogeny	2	48	May 15, 2023
correlation between sequencing depth and richness, despite normal looking rarefaciton curves	6	478	May 11, 2023
which file should I use for generating beta-diversity?	7	151	May 11, 2023
PICRUSt2 alternative	3	151	May 9, 2023
ANCOM-BC visualization	10	117	May 6, 2023
Dada2 feature table: Frequency per sample & Frequency per sample dada2 , feature-table	2	51	May 4, 2023
qiime2 picrust graphical representation and post analysis	4	63	May 2, 2023
use of blank samples in 16S profiling	1	74	May 1, 2023
uneven coverage of sequencing and rarefactions	5	91	April 30, 2023
QIIME2 on Docker step by step?	5	1509	April 28, 2023
loss of taxonomic resolution at L4	5	79	April 28, 2023
Ancombc fdr values	0	77	April 26, 2023
Are there difference rarefaction cut-off and rarefying in the micorbiome analysis ? feature-table , rarefaction	9	168	April 26, 2023
Using PCoA versus PCA	5	255	April 26, 2023
About Unifrac distance calculation between two sample under different situations unifrac	3	73	April 25, 2023
priors in qiime2-dada2 dada2	3	77	April 25, 2023
What is the meaning of uncultured in taxonomy string?	1	65	April 21, 2023
Dealing with skewed diversity in low abundance ASVs?	1	56	April 20, 2023
Selecting OTU picking methods in QIIME 2	3	57	April 20, 2023
ASV feature assigning taxa ancom	2	52	April 19, 2023

Frequent Questions and "Best of the QIIME 2 Forum"

best-of-the-forum

The following is a list of frequently asked questions on the forum, with answers, to serve as a point of reference for forum users to quickly find answers, or for forum users and moderators to use as a reference when hel…