General Discussion


Topic Replies Views Activity
Frequent Questions and "Best of the QIIME 2 Forum"
best-of-the-forum

The following is a list of frequently asked questions on the forum, with answers, to serve as a point of reference for forum users to quickly find answers, or for forum users and moderators to use as a reference when hel…

2 2030 February 27, 2020
About the General Discussion category
0 334 November 14, 2018
Combining studies from same 16S region but with different primers
4 44 May 11, 2021
How to create an OTU table out of phyla abundance?
taxonomy
1 25 May 10, 2021
PICRUST2 superpathways
picrust
0 39 April 21, 2021
How do I perform diversity analysis (e.g. alpha diversity) on ASV number from different runs
diversity ,  asv
2 29 May 7, 2021
Build closed reference OTU database from HOMD for multiple hypervariable regions
1 21 May 7, 2021
Trouble in alignment and taxonomy assignment for dataset with big dataset
closed-reference
1 27 May 6, 2021
Merging two samples given phylogenetic tree, OTU table, & metadata
1 31 May 4, 2021
Analyzing subset of microbiome data
2 53 May 4, 2021
Tools for conducting a Cross validation study design
5 66 April 29, 2021
train classifier
feature-classifier ,  taxonomy
7 114 April 29, 2021
16S Sequencing in Nextseq
1 31 April 28, 2021
A technical question related to DNA extraction
7 138 April 24, 2021
DOUBT about longitudinal analyses
2 48 April 23, 2021
acceptable amount of unassigned OTUs
5 102 April 23, 2021
how to proceed?
5 72 April 22, 2021
Correlations and the compositionality issue
2 55 April 20, 2021
Missing Fusobacterium in colon cancer 16S RNAseq data
7 90 April 19, 2021
Core features / normalization
rarefaction ,  core-features
0 67 April 1, 2021
What quality control should I do on this .qzv file?
1 37 April 12, 2021
Are "515F/806R" and "U515F/806R" exact synonyms?
1 65 April 6, 2021
Can anybody tell me what frequecy means? Thanks a lot !
deblur
4 47 April 6, 2021
QIIME2 on Docker step by step?
1 45 April 4, 2021
Methods for integrating 16S and RNAseq data
16s
2 72 April 1, 2021
Analysing fungal ITS data - questions about the pipeline - phylogenetic analysis
2 108 April 1, 2021
Alpha diversity metrics for unequal sample size groups
4 172 April 1, 2021
Mice model gut Microbiome study
1 93 March 29, 2021
qPCR hacks in QIIME 2?
2 108 March 29, 2021
Odd PCoA results based bray-curtis distance
pcoa
2 66 March 29, 2021