Latest General Discussion topics

Topic		Replies	Views	Activity
Frequent Questions and "Best of the QIIME 2 Forum" best-of-the-forum The following is a list of frequently asked questions on the forum, with answers, to serve as a point of reference for forum users to quickly find answers, or for forum users and moderators to use as a reference when hel…		2	3521	February 27, 2020
About the General Discussion category		0	518	November 14, 2018
QIIME2/DADA2 vs singletons dada2 , queued		2	18	August 14, 2022
FMT tutorial: denoise-single vs paired		1	30	August 11, 2022
Weird result from analyzing a public rumen microbiome dataset by Qiime2 dada2 , feature-classifier , feature-table		1	30	August 11, 2022
archaea 16s amplicon seq analysis dada2		3	34	August 10, 2022
Kraken2 versus QIIME2 (dada2) for PacBio Hifi reads dada2		1	47	August 6, 2022
How to know the sample sequence IDs that each ASV represent? dada2		6	69	August 5, 2022
How to find sample IDs from publicly available fastq.gz filtering , queued , filter-features		0	36	August 4, 2022
Laptop suggestions for running QIIME2 and other tools dada2 , feature-classifier		2	60	August 2, 2022
q2-sidle reference database meaning		7	183	August 2, 2022
Order of commands for taxonomy analysis dada2 , demux , taxonomy		2	52	August 1, 2022
PCoA biplot with Jaccard distance matrix pcoa , biplot	$fracand - Original Poster$	2	112	August 1, 2022
collapseNoMismatch		2	125	July 29, 2022
ADONIS interpretation sanity check adonis		1	61	July 26, 2022
Why the total number of observed otus does not agree with the total number of otus? otus		1	54	July 26, 2022
Interpretation of Bray curtis box whisker plot beta		2	48	July 26, 2022
Chao1 and Shannon negatively correlated best-of-the-forum		1	74	July 21, 2022
Concatenate R1 and R2 for reads that can't join		5	72	July 19, 2022
Producing this differential abundance visualization.		4	72	July 18, 2022
Sampling depth -- is low retained (%) feature value is an issue for further study?		1	68	July 16, 2022
Hello! I got a question (skin microbiome analysis).		2	82	July 15, 2022
Euclidean distance in heatmap and Shannon index formulas feature-table		2	46	July 14, 2022
the weird microbial composition when using different library preparation kit dada2 , import		1	85	July 13, 2022
Doing mantel test on each taxon		1	55	July 12, 2022
PERMANOVA and PERMDISP both significant		1	75	July 6, 2022
q2 Longitudinal - help with understanding the output, more precisely, what is the scale		2	52	July 6, 2022
¿How do i know how many ASVs were taxonomically assigned in Qiime2?		1	53	July 3, 2022
Suggestions for using nifH ARB database for taxonomy assignment in QIIME2 taxonomy		8	840	June 30, 2022
archaea , bacteria and the SILA database		1	55	June 29, 2022

Frequent Questions and "Best of the QIIME 2 Forum"

best-of-the-forum

The following is a list of frequently asked questions on the forum, with answers, to serve as a point of reference for forum users to quickly find answers, or for forum users and moderators to use as a reference when hel…