General Discussion


Topic Replies Views Activity
Frequent Questions and "Best of the QIIME 2 Forum"
best-of-the-forum

The following is a list of frequently asked questions on the forum, with answers, to serve as a point of reference for forum users to quickly find answers, or for forum users and moderators to use as a reference when hel…

2 2594 February 27, 2020
About the General Discussion category
0 423 November 14, 2018
What are the commonly used primers to amplify all bacterial 16SrRNA gene ?
1 21 October 28, 2021
Minimum sample size for songbird analysis
q2-songbird
2 8 October 28, 2021
Analysis with V1-V2 variable region
6 53 October 25, 2021
Interpreting QIIME2 Outputs: Dos and Don'ts
1 91 October 21, 2021
How to label multi time point samples
import
2 29 October 20, 2021
free publication fee microbiome journals
0 59 October 20, 2021
Help with interpreting beta diversity result - Ja
1 35 October 18, 2021
What are the differences between 16SrRNA gene of archae and bacteria ?
0 34 October 14, 2021
Sanger sequences as a database to look for contaminations
6 169 October 16, 2021
difference in taxonomy assignation between frogs and qiime2
0 23 October 13, 2021
How to identify Methanobrevibacter smithii and other archeae bacteria via qiime2 ?
2 74 October 5, 2021
Consistency or bias in read counts across V1-V9 regions
0 40 September 29, 2021
Primer naming inconsistencies?
16s ,  primers
2 67 September 29, 2021
Processing samples with Dada2 in different batches changes results
dada2
7 204 September 28, 2021
Does it make sense to explore differential abundant OTUs, when 2 groups are not significantly differente according to Permanova?
permanova
5 96 September 24, 2021
18s analysis with Qiime2
1 41 September 23, 2021
ASVs for network and other analysis
2 62 October 23, 2021
v3-v4-99-greengenes-feature-classifier
feature-classifier
1 84 September 22, 2021
a test like friedman
0 35 September 20, 2021
Integrating decontam with QIIME 2
decontam
2 67 September 18, 2021
Silva 138 region V3-V4 16S rRNA classifier
feature-classifier
0 48 September 15, 2021
How to incorporate mock community into my analysis
mock-communities
3 66 September 15, 2021
Two clusters based on Faith phylogenetic diversity
1 54 September 14, 2021
How to process sequence data sets with different length from different platforms?
fastq ,  cutadapt ,  vsearch ,  dada2
0 36 September 14, 2021
Dada2 denoise optimization: better to maximize features or reads?
dada2
0 42 September 14, 2021
how to know the data type of sequencing results?
import
2 61 September 13, 2021
combination different dataset
taxonomy
2 94 September 3, 2021
Estimating gigabytes from gigabases
2 51 September 3, 2021