Latest General Discussion topics

Topic	Replies	Views	Activity
Frequent Questions and "Best of the QIIME 2 Forum" best-of-the-forum The following is a list of frequently asked questions on the forum, with answers, to serve as a point of reference for forum users to quickly find answers, or for forum users and moderators to use as a reference when hel…	2	7277	February 27, 2020
About the General Discussion category	1	970	March 13, 2023
How to import paried end sequencing files and full length sequencing files together into qiime2? import , paired-end	3	17	November 21, 2024
QIIME2 Nanopore 18S full length Amplicon sequenced data analysis dada2 , import , feature-classifier , taxonomy	3	51	November 21, 2024
Uneven sample size, a need for rarefaction tool rarefaction	6	42	November 15, 2024
Can ANCOM-BC be used to analyse presence and absence data? ancom	2	29	November 14, 2024
Greengenes2 2022.10 Does Not Have Correct Taxonomic Classifications for Mitochondria and Chloroplast taxonomy	5	131	November 13, 2024
Statistical advice - comparing samples with different indexing/metabarcoding cycle lengths	3	13	November 13, 2024
How can I found the formula and source of the Canberra-Adkins distance measurement in “qiime diversity beta”? diversity , beta	1	22	November 13, 2024
FMTs evaluation: comparison of a single human sample vs 2-3 mouse samples fmt	11	94	November 11, 2024
Random Forest model with environmental longitudinal data sample-classifier	4	47	November 4, 2024
merging data from multiple artifacts from qiita qiita	2	24	November 4, 2024
How to simplify the formula gini index in QIIME2? For example write in a R script. diversity , alpha	2	22	November 1, 2024
sklearn is closed reference, denovo, or open reference classifier?	2	28	October 29, 2024
Sequencing Data import	1	19	October 28, 2024
Advice on feature table filtering dada2 , feature-table	1	16	October 28, 2024
DADA2 before or after quality control	7	111	October 28, 2024
scikit-bio.org has moved and links are broken diversity , beta , alpha	2	33	October 28, 2024
Can data from different amplicon regions be combined for analysis? dada2	1	22	October 22, 2024
Comparison between three groups	5	41	October 21, 2024
Are barcode fastqfiles necessary for analysis? barcode , fastq	4	19	October 15, 2024
stats post-hoc ANCOM ancom	7	48	October 15, 2024
The difference between the simpson and simpson_e indices	3	109	October 12, 2024
Training silva classifiers based on NCBI taxonomy feature-classifier , rescript	1	57	October 3, 2024
One vs two adaptor sequences using cutadapt cutadapt , qiime2	4	65	September 27, 2024
Deblur usage for truncation from the end of the read dada2 , deblur	1	11	September 27, 2024
number of samples for differential abundance analysis	2	16	September 26, 2024
Random sampling after DADA2	3	32	September 26, 2024
Interpreting Silva Bacterial Taxonomy (Incertae Sedis) silva	2	54	September 24, 2024
Human gut microbiome study design	2	35	September 23, 2024

Frequent Questions and "Best of the QIIME 2 Forum"

best-of-the-forum

The following is a list of frequently asked questions on the forum, with answers, to serve as a point of reference for forum users to quickly find answers, or for forum users and moderators to use as a reference when hel…