Latest General Discussion topics

Topic	Replies	Views	Activity
Frequent Questions and "Best of the QIIME 2 Forum" best-of-the-forum The following is a list of frequently asked questions on the forum, with answers, to serve as a point of reference for forum users to quickly find answers, or for forum users and moderators to use as a reference when hel…	2	7396	February 27, 2020
About the General Discussion category	1	971	March 13, 2023
loosing reads after dada2 filteration queued	5	21	January 24, 2025
Guidance on Merging and Handling Samples from Multiple Sequencing Runs	3	37	January 22, 2025
da-barplot-ancombc into inkscape	1	17	January 22, 2025
non-fungal sequences in ITS2 analyses	1	15	January 22, 2025
Step by step metabarcoding in fungi	2	16	January 19, 2025
fastqc or similar tool to analyze and compile sequencing data quality fastqc	3	14	January 16, 2025
Database for soil metagenomic 16S: Phytopathogenic? taxonomy , queued	0	19	January 14, 2025
Venn Diagram Creation	1	15	January 9, 2025
Long read 16S amplicon Oxford Nanopore data nanopore	2	101	December 21, 2024
Composition-aware correlation of ASVs from 2 different amplicons correlation , asv	3	22	December 20, 2024
choice of fungal primers its	15	4980	December 9, 2024
Not able to find E. coli in my taxonomy file taxonomy , feature-table , silva	3	32	December 5, 2024
Using ITSxpres with rescript and fit-classifier-naive-bayes	1	19	December 4, 2024
Collapse frequencies by relative abundance per sample	4	24	December 2, 2024
Confusion about the Metadata metadata , manifest	1	13	November 29, 2024
denoising and quality filterin dada2 , vsearch	3	20	November 27, 2024
How to import paried end sequencing files and full length sequencing files together into qiime2? import , paired-end	4	46	November 25, 2024
QIIME2 Nanopore 18S full length Amplicon sequenced data analysis dada2 , import , feature-classifier , taxonomy	4	90	December 22, 2024
Uneven sample size, a need for rarefaction tool rarefaction	6	51	November 15, 2024
Can ANCOM-BC be used to analyse presence and absence data? ancom	2	36	November 14, 2024
Greengenes2 2022.10 Does Not Have Correct Taxonomic Classifications for Mitochondria and Chloroplast taxonomy	5	185	November 13, 2024
Statistical advice - comparing samples with different indexing/metabarcoding cycle lengths	3	15	November 13, 2024
How can I found the formula and source of the Canberra-Adkins distance measurement in “qiime diversity beta”? diversity , beta	1	22	November 13, 2024
FMTs evaluation: comparison of a single human sample vs 2-3 mouse samples fmt	11	99	November 11, 2024
Random Forest model with environmental longitudinal data sample-classifier	5	71	December 6, 2024
merging data from multiple artifacts from qiita qiita	2	26	November 4, 2024
How to simplify the formula gini index in QIIME2? For example write in a R script. diversity , alpha	2	23	November 1, 2024
sklearn is closed reference, denovo, or open reference classifier?	2	29	October 29, 2024

Frequent Questions and "Best of the QIIME 2 Forum"

best-of-the-forum

The following is a list of frequently asked questions on the forum, with answers, to serve as a point of reference for forum users to quickly find answers, or for forum users and moderators to use as a reference when hel…