General Discussion


Topic Replies Activity
Are results made in using other tools (for example Mothur) comparable with those computed on qiime2? 2 January 21, 2020
Can you enter the pipeline at feature table point? 4 January 21, 2020
Is it a reasonable to delete all unclassified and uncultured ASVs in species level ? 5 January 21, 2020
Barcode Files from HMP data and Merging two datasets with different read length 6 February 20, 2020
which method you recommand to do regression analysis of OTU abundance on continuous variable? 5 January 18, 2020
hundreds of samples vsearch OTU 3 January 18, 2020
How to separate hypervariable regions sequenced with 16s Metagenomics Ion torrent 3 January 17, 2020
How to further investigate an increase in diversity 7 January 17, 2020
16S data analysis from minION with QIIME? 10 January 17, 2020
Different versions of Silva for phylogenetic tree and taxonomy classification 2 January 17, 2020
feature-table counts different when exported as tsv file 5 January 16, 2020
Similarity/dissimilarity test for small number of samples... 3 January 16, 2020
How to get Positive Control gut or vaginal microbiome dataset 3 January 16, 2020
How to get the sequences that were taxonomically assigned to my reference database? 6 January 16, 2020
metagenmomics in qiime2 4 January 16, 2020
Does having multiple IDs point to the same species in the database affect taxonomy assignment? 8 February 16, 2020
Normalization of feature-table 8 February 15, 2020
How to dig deeper into specific features? 4 January 13, 2020
meta-analysis and q2-fragments 9 January 11, 2020
Issue about the overview of my codes 4 February 11, 2020
Questions about mock microbiome data sets 15 January 9, 2020
What to do for no significantly different metabolic pathways were found in the metagenomics data? 5 January 7, 2020
Best practice of correlation network construction based on metagenomics data? 1 December 31, 2019
Differences between single end and paired end results 3 February 2, 2020
Is fungi OTUs are analyzed by species, bacteria OTUs by genus common in microbiome study? 2 January 2, 2020
How is the alpha-diversity calculated in Qiime 2? What is the relationship with the exported alpha rarefaction data? 3 December 31, 2019
16s and metagenomics result rarely overlap 2 December 26, 2019
merging data with different sequence lengths 5 December 26, 2019
A few papers to write and interpret the obtained results 3 December 23, 2019
How to set trim and trunc in a curvilinear plot? 4 December 23, 2019