|
Merging species derived from spiked species
|
|
0
|
93
|
June 3, 2024
|
|
Microbiome Taxa Analysis for two factor interaction
|
|
2
|
87
|
June 12, 2024
|
|
Cage effect ANOVA
|
|
3
|
97
|
June 12, 2024
|
|
Changing the beta-group-significance q-value correction?
|
|
2
|
57
|
June 8, 2024
|
|
All sequences either 159 or 151 bp, normal? Illumina Novaseq6000
|
|
1
|
86
|
June 7, 2024
|
|
Normalizing Presence/Absence Data
|
|
3
|
128
|
June 5, 2024
|
|
Removal of Illumina Adapters
|
|
1
|
92
|
May 30, 2024
|
|
Low percentage of merged sequences
|
|
3
|
88
|
May 27, 2024
|
|
DADA2 error model with small dataset
|
|
1
|
84
|
May 23, 2024
|
|
Is it a bad idea to use DADA2 for non-metagenomic amplicon sequencing NGS data?
|
|
5
|
113
|
May 20, 2024
|
|
What is the difference between a read, sequence, and ASV?
|
|
2
|
151
|
May 17, 2024
|
|
Do primers need to be removed? Or are we talking about adapters?
|
|
8
|
351
|
May 16, 2024
|
|
dada2 trim and trunq means
|
|
2
|
79
|
May 15, 2024
|
|
Databases for data sharing
|
|
2
|
92
|
May 15, 2024
|
|
classify-consensus-blast -- BLAST6 file is empty
|
|
1
|
76
|
May 13, 2024
|
|
Are outliers driving my significant differences in abundance?
|
|
2
|
132
|
May 8, 2024
|
|
ANCOVA for ANCOMBC
|
|
6
|
172
|
June 9, 2024
|
|
When to filter samples based on rarefying depth before taxabarplot
|
|
4
|
80
|
May 7, 2024
|
|
Primer show up again after removal using cutadapt in qiime2 DADA2
|
|
11
|
236
|
May 6, 2024
|
|
Species Level Assignments with SILVA
|
|
2
|
228
|
April 23, 2024
|
|
Combining taxonomy from different classifiers to eliminate unidentified sequences? [newbie question]
|
|
2
|
184
|
May 2, 2024
|
|
The concept of co-occurrence network structure
|
|
3
|
162
|
May 1, 2024
|
|
16s rRNA sequencing for V-3-V4 hyper variable region?
|
|
9
|
1365
|
April 23, 2024
|
|
Is the q2galaxy graphical interface
|
|
1
|
103
|
April 22, 2024
|
|
16S full length nanopore to ASVs (new approach?)
|
|
6
|
427
|
April 18, 2024
|
|
Does presence of samples with high microbial load affect samples with low microbial load in a 16S run?
|
|
1
|
110
|
April 15, 2024
|
|
Can we use extracted reference reads to calculate expected amplicon sizes?
|
|
7
|
2387
|
April 15, 2024
|
|
New taxonomy names in old classifier
|
|
2
|
124
|
April 12, 2024
|
|
Filter ASV by frequency
|
|
1
|
112
|
April 11, 2024
|
|
Different Sequencing Data -> Different Quality
|
|
3
|
98
|
April 10, 2024
|
