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tutorial for merging different sequencing data in qiime2
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6
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75
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February 26, 2025
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Sequencing bacterial 16S amplicons and Fungal ITS amplicons from same soil samples using same indices
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2
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53
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February 26, 2025
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Identification of Acanthamoeba in 18S rDNA analysis
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1
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19
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February 24, 2025
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Recommended timepoints for soil microbiome studies?
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5
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50
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February 19, 2025
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Code Review: Custom QIIME 2
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5
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45
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March 22, 2025
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Can MiSeq Reagent Kit v2 (500 cycles) be used to sequence V3-V4 region of bacterial 16S rRNA gene?
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4
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71
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February 19, 2025
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How to deal with multiple runs for one sample?
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8
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63
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February 18, 2025
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Nanopore Long Read Demultiplexed Full 16S rRNA Seq
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8
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860
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February 17, 2025
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Issue with Taxonomy Assignment Using Kraken and Custom Database (BOLD, Nemabiome) in QIIME2
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4
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204
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February 14, 2025
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Uneven sample size, a need for rarefaction tool
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9
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118
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February 11, 2025
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Analysing merged sequences
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3
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53
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February 9, 2025
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non-fungal sequences in ITS2 analyses
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3
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89
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February 8, 2025
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Unnasigned ASVs at lower taxonomic ranks can alter metrics of alpha and beta diversity that use the phylogenetical distance?
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2
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36
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January 30, 2025
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High presence of chloroplasts in V3-V4 16S rRNA amplification
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1
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48
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January 27, 2025
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loosing reads after dada2 filteration
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7
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71
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January 25, 2025
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Guidance on Merging and Handling Samples from Multiple Sequencing Runs
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3
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155
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January 22, 2025
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da-barplot-ancombc into inkscape
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1
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35
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January 22, 2025
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Step by step metabarcoding in fungi
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3
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49
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February 20, 2025
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fastqc or similar tool to analyze and compile sequencing data quality
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3
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145
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January 16, 2025
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Database for soil metagenomic 16S: Phytopathogenic?
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0
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33
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January 14, 2025
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Venn Diagram Creation
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1
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47
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January 9, 2025
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Long read 16S amplicon Oxford Nanopore data
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2
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657
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December 21, 2024
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Composition-aware correlation of ASVs from 2 different amplicons
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3
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43
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December 20, 2024
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choice of fungal primers
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15
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6197
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December 9, 2024
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Not able to find E. coli in my taxonomy file
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3
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51
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December 5, 2024
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Using ITSxpres with rescript and fit-classifier-naive-bayes
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1
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31
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December 4, 2024
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Collapse frequencies by relative abundance per sample
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4
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47
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December 2, 2024
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Confusion about the Metadata
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1
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28
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November 29, 2024
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denoising and quality filterin
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3
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34
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November 27, 2024
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How to import paried end sequencing files and full length sequencing files together into qiime2?
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4
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75
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November 25, 2024
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