|
Interpreting usefulness of sequence data from quality scores
|
|
3
|
120
|
August 15, 2025
|
|
How to account for uneven sampling
|
|
2
|
122
|
August 9, 2025
|
|
Shall I need to remove ASV with prevelance in one sample?
|
|
4
|
160
|
August 8, 2025
|
|
Exclude significant results from betadisper from adonis2?
|
|
0
|
140
|
July 19, 2025
|
|
16S SRNA
|
|
1
|
108
|
August 2, 2025
|
|
Cage effect ANOVA
|
|
11
|
362
|
July 31, 2025
|
|
GSR database in QIIME2?
|
|
2
|
84
|
July 28, 2025
|
|
Problems with Taxonomic Assignment
|
|
1
|
71
|
July 25, 2025
|
|
Why is there a size difference between my PCR product (~400 bp) and the final representative sequence (313 bp)?
|
|
4
|
312
|
July 22, 2025
|
|
Sequence and taxonomy files for Silva v138.2
|
|
2
|
262
|
July 21, 2025
|
|
Beginner's Project
|
|
2
|
70
|
July 21, 2025
|
|
Recommended Step for Merging Metagenomics Datasets
|
|
1
|
99
|
July 16, 2025
|
|
Quality control for shotgun metagenomics
|
|
2
|
735
|
March 13, 2024
|
|
Merging qiime2 sample metadata with exterior taxonomic classifications
|
|
1
|
68
|
July 13, 2025
|
|
PR2: Division vs. Phylum
|
|
1
|
116
|
July 11, 2025
|
|
Is it necessary to separate ASVs classified at genus level into their respective sequences in ANCOMBC2 or other differential abundance analysis?
|
|
2
|
205
|
July 8, 2025
|
|
Transforming Alpha Diversity Metrics for Mixed Effects Modeling
|
|
2
|
88
|
July 8, 2025
|
|
Best workflow for samples with high off-target (host) amplification
|
|
7
|
194
|
July 8, 2025
|
|
High percentage of unassigned reads (metagenomics)
|
|
6
|
261
|
July 3, 2025
|
|
SILVA trained version for V3-V4 amplicon using 341F/785R primers
|
|
3
|
377
|
July 2, 2025
|
|
Looking for Sensible Qiime2 CLI Aliases
|
|
1
|
94
|
July 1, 2025
|
|
How to simplify the formula gini index in QIIME2? For example write in a R script.
|
|
2
|
102
|
November 1, 2024
|
|
Looking for Comprehensive Qiime2 Documentation
|
|
3
|
193
|
June 23, 2025
|
|
Request for Pre-trained SILVA V1–V3 Naive Bayes Classifier
|
|
2
|
113
|
June 18, 2025
|
|
classify-sklearn vs classify-consensus-vsearch - classification depth
|
|
2
|
183
|
June 13, 2025
|
|
Shotgun sequencing of Fungi - UNITE or KRAKEN2
|
|
1
|
145
|
June 11, 2025
|
|
Feature table and representative sequences for downstream analyses
|
|
1
|
55
|
June 11, 2025
|
|
PERMANOVA and DESeq2: Re-evaluating Covariates After Subsetting by Time Point
|
|
1
|
91
|
June 9, 2025
|
|
maarjAM database
|
|
3
|
261
|
June 6, 2025
|
|
Analysing with multiple public datasets
|
|
4
|
86
|
June 5, 2025
|
