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Density plots along PCoA plot axes?
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7
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116
|
April 23, 2025
|
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Getting oxygen requirements for bacterial species identified by 16S sequencing
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4
|
299
|
April 23, 2025
|
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taxonomy mitochondria vs D_4__Mitochondria
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2
|
45
|
April 22, 2025
|
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PERMANOVA and PERMDISP and pairwise
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7
|
328
|
April 21, 2025
|
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still default behavior after setting TMPDIR
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8
|
134
|
May 17, 2025
|
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Best analysis to do after CCA?
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1
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57
|
April 14, 2025
|
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Alpha diversity without rarefaction
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2
|
101
|
April 10, 2025
|
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Best Studies for Genus Accuracy of 16S Sequencing
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5
|
143
|
April 7, 2025
|
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How can I perform learnErrors on a subset of reads?
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3
|
62
|
April 7, 2025
|
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NCBI: How to link BioSample to BankIt submission?
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0
|
44
|
March 28, 2025
|
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QIIME in clinical hospital and commercial laboratory settings
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11
|
186
|
April 4, 2025
|
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Visualizing ANCOMBC data over time
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3
|
192
|
April 1, 2025
|
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QIIME2 microbiome analysis and python version
|
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2
|
82
|
March 29, 2025
|
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Why do we get higher species level assignment with an older GTDB classifier than with a more recent one?
|
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8
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243
|
March 27, 2025
|
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TEF1 metabarcoding: Should I use BLAST or VSEARCH instead of Naive Bayes?
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4
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114
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March 26, 2025
|
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Investigating the Impact of Travel-Induced Environmental Shifts on Microbiome Stability: A Call for Collaborative Field Studies and Methodological Insights
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0
|
57
|
March 26, 2025
|
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DADA2 generated rep.seqs in R to QIIME2 for making use of the "qiime fragment-insertion sepp"
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1
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43
|
March 25, 2025
|
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General or taxonomic level alpha diversity?
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2
|
124
|
March 24, 2025
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Reading the generated data.
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1
|
32
|
March 24, 2025
|
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Closed reference OTU picking of V3-V4 amplicon against full-length reference database
|
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3
|
85
|
March 21, 2025
|
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Question about analyzing different sample types
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3
|
108
|
March 20, 2025
|
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Contents of imported database
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6
|
78
|
March 18, 2025
|
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Missing species sequence on Greengenes2 2024.09
|
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2
|
70
|
March 18, 2025
|
|
How important is it to remove spacers prior to DADA2 filtering trimming, etc?
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2
|
58
|
March 17, 2025
|
|
ASV with missing taxonomic annotation
|
|
2
|
131
|
March 11, 2025
|
|
Dual-End Barcoding for 16S rRNA Primers: Using Golay Barcodes on Both Forward and Reverse Primers
|
|
5
|
100
|
April 10, 2025
|
|
How to download seven-number-summaries TSV directly
|
|
1
|
44
|
March 7, 2025
|
|
PCoA analysis Interpretation Doubt
|
|
3
|
78
|
March 6, 2025
|
|
Is it valid to rename ASVs classified as ‘uncultivated’ as ‘unclassified’?
|
|
9
|
148
|
March 5, 2025
|
|
OTU Tables Relative Frequency to Relative Abundance
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|
9
|
196
|
March 4, 2025
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