|
changing --p-max-ee-r to obtain more filtered sequence in DADA2
|
|
1
|
17
|
September 25, 2020
|
|
different taxa result between deblur and dada2
|
|
1
|
24
|
September 25, 2020
|
|
Few sequences were left after filtering
|
|
5
|
25
|
September 24, 2020
|
|
denoising sequences without dereplicating
|
|
2
|
23
|
September 22, 2020
|
|
Add even more DADA2 parameters
|
|
1
|
26
|
September 17, 2020
|
|
High number of chimera and low prevalence for ASVs
|
|
3
|
54
|
September 15, 2020
|
|
Denoising issues in Dada2
|
|
7
|
85
|
September 11, 2020
|
|
Low percentage of merged reads after denoising/merging with dada2.
|
|
3
|
51
|
September 10, 2020
|
|
Error while running dada2
|
|
8
|
81
|
September 9, 2020
|
|
error in qiime dada2 denoise-paired command
|
|
4
|
49
|
September 8, 2020
|
|
Low feature counts after DADA2
|
|
6
|
119
|
September 2, 2020
|
|
ITS data processing through dada2
|
|
3
|
42
|
September 4, 2020
|
|
eroor plugin from its express
|
|
3
|
45
|
August 27, 2020
|
|
methods for processeng fungal ITS2 DATA IN QIIME 2
|
|
3
|
53
|
August 27, 2020
|
|
Each feature only seen in 1 sample
|
|
13
|
121
|
September 25, 2020
|
|
OTU picking with DADA2 input
|
|
4
|
55
|
September 25, 2020
|
|
How to define the rare and abundant taxa from the ASV feature table?
|
|
3
|
79
|
August 22, 2020
|
|
extremely low "merged" score after using DADA2
|
|
7
|
75
|
September 14, 2020
|
|
Difference between single-end and pyrosequencing processing?
|
|
5
|
64
|
September 13, 2020
|
|
Huge loss of data while merging in DADA2.
|
|
4
|
67
|
September 15, 2020
|
|
An error occured while running DADA2 in R
|
|
15
|
115
|
September 11, 2020
|
|
package or namespace load failed for ‘dada2’ `CXXABI_1.3.11' not found
|
|
7
|
69
|
September 5, 2020
|
|
Plugin error from dada2: An error was encountered while running DADA2 in R (return code 1), please insp ect stdout and stderr to learn more. See above for debug info.
|
|
6
|
84
|
September 3, 2020
|
|
error from dada2 plugin
|
|
19
|
222
|
August 30, 2020
|
|
Combine seq fna files
|
|
6
|
64
|
August 29, 2020
|
|
An error was encountered while running DADA2 in R (return code -9), Not CPU or Memory problem.
|
|
5
|
101
|
August 28, 2020
|
|
Why denoising itself on DADA2 is filtering some reads?
|
|
6
|
75
|
August 28, 2020
|
|
importing seq fna from qiime 1
|
|
3
|
62
|
July 27, 2020
|
|
Mock community taxonomy not accurate, could cutadapt step be causing this?
|
|
16
|
225
|
August 26, 2020
|
|
Trimming MiSeq sequencing data individually
|
|
5
|
89
|
August 22, 2020
|
