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ITS data analysis : How to determine which dada2 analysis is the best
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5
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41
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January 22, 2021
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selecting trim/trunc lengths with dada2
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8
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45
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January 22, 2021
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ITS2 primers trimming without the primers sequences
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4
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47
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January 19, 2021
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running qiime2 on metagenome-derived illumina mitags
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3
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23
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January 14, 2021
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Can you analyse two data sets sequence with V3 and V4 together?
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2
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27
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January 12, 2021
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Confusion about ' --p-trunc-len-f '
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3
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38
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January 7, 2021
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raw paired sequences were mixed
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6
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80
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December 29, 2020
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An error was encountered while running DADA2 in R (return code 1), please inspect stdout and stderr to learn mor
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3
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61
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January 21, 2021
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i can not get data from reads merge in dada2 step
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4
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60
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January 16, 2021
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Each feature was observed in one sample
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7
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74
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January 15, 2021
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Each feature was observed in one sample
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3
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43
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December 14, 2020
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qiime2 2020.8 dada2: An error was encountered while running DADA2 in R (return code 1), please inspect stdout and stderr to learn more.
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4
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84
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January 10, 2021
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After dada2 denoising most of samples have feature count zero
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4
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69
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January 3, 2021
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A question about meta-analysis using qiime2-DADA2 or qiime1-closed OTU
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12
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146
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January 2, 2021
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An error was encountered while running DADA2 in R (return code -9)
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6
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648
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December 1, 2020
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'No read passes the filter' in denoising step regardless of truncation parameter
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4
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65
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December 31, 2020
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Using DADA2 with .fastq files downloaded from NCBI SRA - sequencing runs unknown
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13
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183
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December 26, 2020
|
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Unassigne taxonomy issue
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5
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94
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December 26, 2020
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Identical ASVs with and without adapter from Cutadapt/dada2
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6
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108
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December 21, 2020
|
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Alpha diversity metrics change after dada2/deblur
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5
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116
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December 20, 2020
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Creating & Exporting ASV tables
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6
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120
|
December 19, 2020
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Updating ref-seq and table with modified metadata?
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3
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65
|
December 18, 2020
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Importing two directions 454 seq data for denoise-pyro
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9
|
107
|
December 11, 2020
|
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Erro excuting DADA2: Mismatched forward and reverse sequence
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4
|
65
|
December 11, 2020
|
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An error was encountered while running DADA2 in R (return code -9) while running qiime dada2 denoise-paired
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3
|
62
|
December 10, 2020
|
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16S V3-V4 length : what to do with the sequences of shorter than expected length after DADA2?
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11
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159
|
December 8, 2020
|
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Reproduce QIIME2 DADA2 results in DADA2 R
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6
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117
|
December 8, 2020
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DADA2 error in R (Consistantly getting return codes 1, -6, -11)
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3
|
97
|
December 7, 2020
|
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An error was encountered while running DADA2 in R (return code 1). 'names' attribute [48] must be the same length as the vector [24]
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5
|
76
|
November 28, 2020
|
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Add FIGARO tool to optimize trimming/truncating parameters in DADA2
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5
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154
|
November 3, 2020
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