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DADA2 fails silently on SLURM cluster (QIIME2 2024.10) — No .qza outputs, no error messages
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1
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13
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May 22, 2025
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QIIME2 microbiome analysis and python version
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2
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54
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March 29, 2025
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Invalid value for 'emp-paired-end-sequences.qza'
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4
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23
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April 6, 2025
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Converting Ion Torrent Amplicon Data (V3-V4) to PICRUSt2-Compatible Files (.fna and .biom)
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8
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103
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April 1, 2025
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BadZipFile: how to find the corrupted file?
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5
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51
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March 29, 2025
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Issue importing Paired end sequences with quality and interactive quality plot
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2
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15
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March 20, 2025
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Golay Barcodes not being detected with demux
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5
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38
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March 8, 2025
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Which position is best for trimming in a paired-end approach?
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11
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74
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February 25, 2025
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[demux summarize] Invalid value for '--i-data': [Errno 9] Bad file descriptor
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9
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18
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December 10, 2024
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demux for fastq files that don't have barcode in them?
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4
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25
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November 30, 2024
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Dada2 unable to run
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2
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32
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November 30, 2024
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Interpreting Interactive Quality Plot
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2
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59
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November 14, 2024
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Merging after denoising step
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15
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210
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October 12, 2024
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QIIME2 Demultiplexing Sequence
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7
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64
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October 4, 2024
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Plugin error from demux:Value must be a nonnegative integer or None
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2
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17
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September 20, 2024
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Modification of demux emp-paired golay-error-correction
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8
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243
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July 17, 2024
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quality-filter q-score on joined demux ignoring reverse reads
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2
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75
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May 26, 2024
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qiime demux emp-paired Invalid value for '--i-seqs': Expected an artifact of at least type
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4
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162
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May 6, 2024
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data demultiplexing error
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12
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293
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May 13, 2024
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Error in dumx.qza visualization (converting it into demux.qzv)
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2
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176
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April 20, 2024
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demux emp-paired killed after 2-3 days running
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4
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124
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March 30, 2024
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Demux and subsampling
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7
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235
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March 25, 2024
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Problem processing Element AVITI 16S data (most discarded despite high phred scores)
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22
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865
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March 26, 2024
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Demux results in missing samples from 3 separate libraries
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5
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153
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March 15, 2024
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Abnormal high percentage of unclassified bacteria
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2
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319
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February 12, 2024
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Plugin error from demux--AttributeError: 'NoneType' object has no attribute 'strip'
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6
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293
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January 28, 2024
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Is there a multiple_split_libraries.py in QIIME2
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5
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144
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January 6, 2024
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demux visualization
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2
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178
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December 31, 2023
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Low read abundance after demultiplexing
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10
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220
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December 19, 2023
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Demultiplexing reads without sample barcode metadata
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2
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282
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November 20, 2023
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