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QIIME 2 Meta-Analysis of Rhizosphere Microbiome with Mixed V3-V4/V4 Data: Best Practices for Downstream Analysis
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13
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215
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April 17, 2025
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alpha and beta diversity
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2
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20
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April 6, 2025
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Alpha diversity statistics including singletons
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7
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77
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March 21, 2025
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q2 diversity beta-group-significance performance
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11
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73
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December 20, 2024
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How can I found the formula and source of the Canberra-Adkins distance measurement in “qiime diversity beta”?
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1
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27
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November 13, 2024
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How to simplify the formula gini index in QIIME2? For example write in a R script.
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2
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28
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November 1, 2024
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scikit-bio.org has moved and links are broken
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2
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42
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October 28, 2024
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Alpha diversity for each phylum
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2
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47
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August 28, 2024
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alpha correlation and adjusted p-value
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7
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227
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July 2, 2024
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how can I do so that I can compare the diversity of different group
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8
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111
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July 29, 2024
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Error beta rarefaction plugin
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7
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124
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June 28, 2024
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Unweighted Unifrac looks weird
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2
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145
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June 21, 2024
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Error jaccard_emperor
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20
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286
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May 12, 2024
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Kruskal-Wallis: 1-tailed or 2-tailed?
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5
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252
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April 18, 2024
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Rarefaction: diversity or richness?
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3
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652
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March 7, 2024
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significant Permanova but non significant Permdisp
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2
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330
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February 9, 2024
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Abnormal high percentage of unclassified bacteria
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2
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317
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February 12, 2024
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faithpd-error -diversity metrics
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21
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804
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February 4, 2024
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weighted UniFrac result in different plot
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2
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184
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January 28, 2024
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Alpha and Beta Diversity Explanations and Commands https://forum.qiime2.org/t/alpha-and-beta-diversity-explanations-and-commands/2282
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9
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403
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January 8, 2024
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diversity plugin error [Errno 8]
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6
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397
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December 15, 2023
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Distance metric wanted for ranked sets with missing values (beta diversity metric)
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2
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277
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November 10, 2023
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QIIME 2 Failed Diversity Rule with Test Data (M2 Mac)
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2
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204
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November 23, 2023
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Plugin error from diversity: [Errno 8] Exec format error: 'faithpd'
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8
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1100
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November 2, 2023
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Help in performing alpha-rarefaction diversity analysis
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15
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609
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October 15, 2023
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Error: Alpha rarefaction curve after merging the data of two different runs
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5
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258
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October 14, 2023
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All numbers are identical in kruskal
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2
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736
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October 9, 2023
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core-metrics-phylogenetic and negative eigenvalues
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4
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262
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September 20, 2023
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Alpha and Beta Diversity Plots
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2
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1126
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August 7, 2023
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R squared on qiime diversity beta-group-significance
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2
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417
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September 4, 2023
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