dbotu_q2 plugin issue: appears to install but plugin not found and won't execute
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5
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46
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April 17, 2024
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I want to get the mean and median abundance or relative abundance for each bacteria species from OTU tables
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8
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225
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January 14, 2024
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Many questions about clustering in the qiime vsearch plugin
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10
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397
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January 11, 2024
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Alpha and Beta Diversity Explanations and Commands https://forum.qiime2.org/t/alpha-and-beta-diversity-explanations-and-commands/2282
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9
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195
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January 8, 2024
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Converting ASVs from DADA2 to OTUs
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12
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447
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November 10, 2023
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OTU vs ASV Analysis
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4
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480
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October 13, 2023
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ASV or OTU ? What do I have?
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4
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286
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October 2, 2023
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Relative Abundance considering OTU
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9
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698
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August 9, 2023
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How to build an OTU table
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2
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747
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July 28, 2023
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How to know which sequences are included in an OTU?
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6
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396
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June 2, 2023
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About OTU clustering of fasta files
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4
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293
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May 28, 2023
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issues moving between greengenes classification and diversity metrics
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4
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317
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April 30, 2023
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If is normal that the exaggerated different between the numbers of ASV and OTU using the same sequencing data?
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1
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406
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January 10, 2023
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Qiime 2 version of Qiime1 "pick_rep_set.py" for picking representative OTU sequences
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4
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326
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December 23, 2022
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REsCRIPt dereplication leads to very different result
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4
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324
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October 31, 2022
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Why the total number of observed otus does not agree with the total number of otus?
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1
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284
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July 26, 2022
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is it realy OTUs table??
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1
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287
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July 25, 2022
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otus and greengenes?
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6
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539
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July 14, 2022
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Difference between observed feature and OTU from taxa bar plot csv file
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6
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299
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June 9, 2022
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observed features vs observed OTUs
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5
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757
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April 17, 2022
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Different OTUs detected using different workflow
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3
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322
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July 28, 2021
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Different OTU identifiers between rep-seqs and feature table files
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5
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697
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July 18, 2021
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DADA2 with Cutadapt to have OTU table
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5
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895
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July 16, 2021
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QIIME2 vs QIIME1 taxonomy and OTU clustering
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3
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1002
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April 24, 2021
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Difficulty with closed reference OTU clustering
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4
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513
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April 1, 2021
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BIOM conversion to tsv
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2
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870
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November 3, 2020
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OTU picking with DADA2 input
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3
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1099
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September 25, 2020
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Pielou’s evenness, Faith's PD and Shannon’s diversity indices for ASVs instead of "species"
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6
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2743
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June 1, 2020
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Tracing the origin of 'Feature ID / OTU ID" name
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2
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2105
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April 15, 2020
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Closed Reference OTU picking vs taxonomic annotation
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2
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2917
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February 4, 2020
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