|
Is there a way to get cutadapt demux-single to run in parallel?
|
|
15
|
112
|
January 9, 2021
|
|
Cutadapt to split multiple regions per sample
|
|
6
|
182
|
December 29, 2020
|
|
Cutadapt doesn't recognize all adapter sequences
|
|
5
|
101
|
January 7, 2021
|
|
Identical ASVs with and without adapter from Cutadapt/dada2
|
|
6
|
108
|
December 21, 2020
|
|
q2-cutadapt output
|
|
28
|
363
|
December 4, 2020
|
|
On two methods of dealing with read-through sequences in q2-cutadapt
|
|
5
|
84
|
November 24, 2020
|
|
cutadapt demux-paired demuxes some but not all samples
|
|
3
|
69
|
November 20, 2020
|
|
trimming joined reads with cutadapt
|
|
3
|
72
|
October 19, 2020
|
|
Quality in reads suddenly decreases with no apparent reason
|
|
7
|
117
|
September 21, 2020
|
|
Handling paired-end dual indexed Illumina FASTQ files
|
|
7
|
186
|
September 21, 2020
|
|
Cutadapt script
|
|
11
|
162
|
September 11, 2020
|
|
cutadapt - adapter vs front
|
|
4
|
204
|
July 27, 2020
|
|
Cutadapt and sequence classification.
|
|
4
|
184
|
July 14, 2020
|
|
Cutadapt demultiplexing with mixed primers
|
|
6
|
219
|
July 10, 2020
|
|
Demultiplexing and Trimming Adapters from Reads with q2-cutadapt
|
|
17
|
23680
|
June 5, 2020
|
|
Can you use cutadapt to remove adapters found within a sequence (i.e. not on the 3' or 5' end)
|
|
3
|
112
|
June 28, 2020
|
|
Losing a ton of reads post demultiplexing with cutadept paired end
|
|
17
|
195
|
June 12, 2020
|
|
Error when trying to demultiplex with cutadapt
|
|
5
|
183
|
April 1, 2020
|
|
Cutadapt Multicore flag
|
|
5
|
139
|
March 23, 2020
|
|
is this a bug of qiime2, version 2019.10, in plugin "qiime cutadapt demux-paired"
|
|
7
|
293
|
February 28, 2020
|
|
Demultiplexing cutadapt Error: Reads are improperly paired ; after arrange direction of reads
|
|
4
|
323
|
November 18, 2019
|
|
Trobleshooting import reads
|
|
6
|
229
|
December 15, 2019
|
|
Barcodes problem in demultiplexing with q2-cutadpt
|
|
5
|
117
|
November 22, 2019
|
|
Most reads failed to merge due to staggered read pairs
|
|
6
|
654
|
November 8, 2019
|
|
To remove primers and spacers or not? - Zero usable reads after DADA2
|
|
17
|
1136
|
November 1, 2019
|
|
Cutadapt and DADA2 QIIME2
|
|
3
|
200
|
October 27, 2019
|
|
Timming primers while seperating multiple markers with cutadapt in QIIME2?
|
|
2
|
109
|
September 8, 2019
|
|
Different taxonomic classification: with or without primers trimming
|
|
16
|
1068
|
July 29, 2019
|
|
Cutadapt trim-paired vs. dada2 (option --p-trim-left)? Help with interpretation of cutadapt output.
|
|
7
|
1229
|
June 26, 2019
|
|
analyzing cDNA single samples
|
|
5
|
143
|
July 13, 2019
|
