Topics tagged paired-end

Topic	Replies	Views	Activity
Export merged paired-end fastq files User Support fastq , export , paired-end	5	30	January 14, 2021
can we convert paired-end-demux.qza to fastq files User Support paired-end , fastq-manifest , fastq	5	58	December 28, 2020
Paired end: 2x151 vs 2x250 for V4 General Discussion paired-end	7	109	November 13, 2020
cutadapt demux-paired demuxes some but not all samples Technical Support cutadapt , barcode , paired-end , demux	3	69	November 20, 2020
MiSeq output quality distribution. General Discussion paired-end , miseq , 16s , quality , v3v4	1	82	September 24, 2020
Diversity changes within an environmental sample at different conditions General Discussion paired-end , diversity	3	72	October 12, 2020
Handling paired-end dual indexed Illumina FASTQ files Technical Support paired-end , import , demux , cutadapt	7	186	September 21, 2020
Error when running dada2 denoise-paired (return code 1) Technical Support paired-end , dada2	5	124	July 5, 2020
Losing a ton of reads post demultiplexing with cutadept paired end User Support paired-end , cutadapt , demux	17	195	June 12, 2020
Cutadapt prior to dada2 denoise-paired User Support paired-end , quality-control , dada2	9	303	May 23, 2020
Error Denoising Paired End Reads User Support paired-end	8	139	May 15, 2020
Denoising of Paired End Reads Technical Support paired-end , dada2	19	453	February 7, 2020
Amplicon size is longer than paired end read length General Discussion paired-end	7	261	November 12, 2019
(Help) Beginner Advice/Guidance for Importing Paired-End Reads User Support multiplexed , paired-end , import	7	400	December 10, 2019
dada2 paired end denoising max overlapping base User Support truncate , paired-end , dada2	4	160	December 2, 2019
Alpha and beta diversity analysis without sample-metadata.tsv User Support alpha , miseq , paired-end , beta , metadata , core-metrics	4	242	August 29, 2019
merging R1 and R2 reads with mixed-orientation files User Support joining , paired-end , dada2	6	807	August 12, 2019
Unable to import paired end sequence data in the moving pictures tutorial in Qiime 2 User Support moving-pictures , paired-end , import	7	389	April 22, 2019
Error while Importing Paired End Data User Support paired-end	6	273	January 5, 2019
Demultiplex joined reads sequences User Support paired-end , demux	12	1202	October 29, 2018
Losing almost all reads after running deblur on paired-end sequences User Support paired-end , deblur	17	1459	September 21, 2018
Determining correct pre-processing pipeline for User Support paired-end , dada2 , cutadapt	6	374	July 23, 2018
Demux error with pairend lectures User Support paired-end , demux , pipe-error	5	249	May 27, 2018
Training paired-end classifier User Support paired-end , feature-classifier	5	492	May 7, 2018
Importing mixed datasets paired and unpaired FASTQs already cleaned up/QCd User Support import , paired-end	13	671	May 6, 2018
Merging forward and reverse casava one eight User Support import , paired-end	5	563	May 5, 2018
Diversity analysis needs metadata file for Casava 1.8 paired-end User Support diversity , paired-end	5	372	April 8, 2018
Miseq paired-end data with no barcodes User Support paired-end , multiplexed , cutadapt	15	1823	April 8, 2018
Importing paired end demultiplexed MiSeq data User Support paired-end , import , fastq-manifest , pending-development	22	5272	March 31, 2018
Qiime vsearch join-pairs error User Support vsearch , paired-end , joining	6	1229	March 27, 2018