Topics tagged paired-end

Topic	Replies	Views	Activity
cutadapt demux-paired demuxes some but not all samples Technical Support cutadapt , barcode , paired-end , demux	2	33	October 19, 2020
MiSeq output quality distribution. General Discussion paired-end , miseq , 16s , quality , v3v4	1	47	September 24, 2020
Diversity changes within an environmental sample at different conditions General Discussion paired-end , diversity	3	43	October 12, 2020
Handling paired-end dual indexed Illumina FASTQ files Technical Support paired-end , import , demux , cutadapt	7	107	September 21, 2020
Error when running dada2 denoise-paired (return code 1) Technical Support paired-end , dada2	5	91	July 5, 2020
Losing a ton of reads post demultiplexing with cutadept paired end User Support paired-end , cutadapt , demux	17	141	June 12, 2020
Cutadapt prior to dada2 denoise-paired User Support paired-end , quality-control , dada2	9	201	May 23, 2020
Error Denoising Paired End Reads User Support paired-end	8	111	May 15, 2020
Denoising of Paired End Reads Technical Support paired-end , dada2	19	335	February 7, 2020
Amplicon size is longer than paired end read length General Discussion paired-end	7	195	November 12, 2019
(Help) Beginner Advice/Guidance for Importing Paired-End Reads User Support multiplexed , paired-end , import	7	305	December 10, 2019
dada2 paired end denoising max overlapping base User Support truncate , paired-end , dada2	4	139	December 2, 2019
Alpha and beta diversity analysis without sample-metadata.tsv User Support alpha , miseq , paired-end , beta , metadata , core-metrics	4	207	August 29, 2019
merging R1 and R2 reads with mixed-orientation files User Support joining , paired-end , dada2	6	610	August 12, 2019
Unable to import paired end sequence data in the moving pictures tutorial in Qiime 2 User Support moving-pictures , paired-end , import	7	353	April 22, 2019
Error while Importing Paired End Data User Support paired-end	6	242	January 5, 2019
Demultiplex joined reads sequences User Support paired-end , demux	12	1083	October 29, 2018
Losing almost all reads after running deblur on paired-end sequences User Support paired-end , deblur	17	1330	September 21, 2018
Determining correct pre-processing pipeline for User Support paired-end , dada2 , cutadapt	6	347	July 23, 2018
Demux error with pairend lectures User Support paired-end , demux , pipe-error	5	230	May 27, 2018
Training paired-end classifier User Support paired-end , feature-classifier	5	456	May 7, 2018
Importing mixed datasets paired and unpaired FASTQs already cleaned up/QCd User Support import , paired-end	13	612	May 6, 2018
Merging forward and reverse casava one eight User Support import , paired-end	5	498	May 5, 2018
Diversity analysis needs metadata file for Casava 1.8 paired-end User Support diversity , paired-end	5	349	April 8, 2018
Miseq paired-end data with no barcodes User Support paired-end , multiplexed , cutadapt	15	1723	April 8, 2018
Importing paired end demultiplexed MiSeq data User Support paired-end , import , fastq-manifest , pending-development	22	4911	March 31, 2018
Qiime vsearch join-pairs error User Support vsearch , paired-end , joining	6	1134	March 27, 2018
Question about analyze paired-end data with Qiime2 User Support dada2 , paired-end	8	910	March 18, 2018
Creating manifest file for fastq files that contain both forward and reverse reads User Support fastq-manifest , paired-end , pending-development , interleaved	4	546	March 3, 2018
Analyzing paired end reads in QIIME 2 Tutorials paired-end , joining , tutorial	10	11698	January 11, 2018