Topics tagged fastq

Topic	Replies	Views	Activity
QIIME2 microbiome analysis and python version General Discussion demux , fastq	2	57	March 29, 2025
Are barcode fastqfiles necessary for analysis? General Discussion barcode , fastq	4	34	October 15, 2024
Rename sample IDs within fastq.gz files Other Bioinformatics Tools fastq	4	444	June 29, 2024
What is the decent amount and quality of reads for 16s sequencing? General Discussion dada2 , fastq	3	331	February 19, 2024
Qiime2 import error: Errno2 Technical Support import , fastq	3	217	November 3, 2023
Importing data / using old and new FASTQ files to compare Technical Support paired-end , fastq	3	299	June 5, 2023
fastq.gz file is not in FastqGzFormat: file is uncompressed Technical Support fastq	3	1219	March 18, 2023
Importing .fastq files from a server into Galaxy running on the same server Technical Support import , fastq	3	440	October 1, 2024
importing FASTQ file issue Technical Support import , fastq	8	906	April 24, 2022
Importing fastq sequences that were previously transformed from ab1 files (Sanger Sequencing) User Support import , fastq-manifest , importing , fastq	5	1394	April 12, 2022
How to process sequence data sets with different length from different platforms? General Discussion dada2 , vsearch , fastq , cutadapt	0	323	September 14, 2021
Using Qiime2 to view the sequences in fastq files General Discussion fastq	2	2113	June 18, 2021
Simple import for fastq demultiplexed merged seqs Technical Support import , fastq , qiime2-r	3	401	April 17, 2021
Export merged paired-end fastq files User Support export , paired-end , fastq	5	892	February 15, 2021
Error when I try to import fastq files Technical Support import , manifest , fastq	3	699	February 13, 2021
can we convert paired-end-demux.qza to fastq files User Support fastq-manifest , paired-end , fastq	4	1250	December 28, 2020
Processing .fastq User Support fastq	13	1079	July 9, 2020
Creating fastq manifest formats from a single multiplexed fastq file User Support import , multiplexed , fastq	15	1486	May 30, 2020
Fastq.gz and quality score length do not match using type: EMPPairedEndSequences from MiSeq Technical Support import , fastq	11	2477	April 13, 2020
I am still struggling with importing FASTQ into qiime 2 User Support fastq	2	683	October 22, 2019
Importing a single fastq file into QIIME2 User Support import , qiime1 , fastq	16	2802	September 23, 2019
Metaphlan2 vs vsearch for fungal metagenomic shotgun sequences User Support vsearch , fungi , fastq	9	2352	December 21, 2018
Closed-reference otu picking from fastq file? User Support import , taxonomy , otus , vsearch , fastq	4	720	September 14, 2018
From QIIME fna to QIIME2 diversity and taxonomy data User Support import , fasta , fastq	9	1743	July 2, 2018
Plugin error from demux User Support import , demux , fastq	4	2528	March 29, 2018
Producing the Reverse-complement of each sequence in fastq files User Support fastq , reverse-complement	2	1240	March 22, 2018
Importing fastq.gz files (Cassava 1.8) User Support import , paired-end , fastq	18	8957	January 27, 2018
Quality filter paired end fastq's User Support quality-filter , paired-end , fastq	6	3524	January 23, 2018
Problem importing fastq.gz files User Support import , fastq	5	2410	December 5, 2017
Finding Primers In Raw Files and Quality Control User Support dada2 , fastq , quality , primers	5	4688	November 28, 2017