QIIME2 microbiome analysis and python version

Hi, I'm grad student in Korea and recently I tried to use QIIME2 on ubuntu WSL.

I tried to download qiime2 and demux plugin.
My data are 16S rRNA sequence fastq files.

I made demux.qza file, but I can't make demux.qzv.
Some posts said that is python version problem.

What version of python do you use or recommend?
I want to process and analyze OTU microbiome data.

Thank you for reading my post :slight_smile:

3 Likes

Hello @jieeeun

Could you share the command you are running and the error message you are receiving?

Also:

Each QIIME 2 version is built using a specific Python version. Which :qiime2: version are you using? Did you install it following the :page_facing_up: official docs ?

Best,

Sergio

2 Likes

Hello @salias !

Thanks your reply :slight_smile:

Actually, I resolved this problem. In my notebook, already downloaded python recent version (3.12) ..
I removed qiime2 and python. redownload python 3.10 and qiime 2024.10.
After that, error message didn't show.

Again, thanks !

Jieun

1 Like