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About the Other Bioinformatics Tools category
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0
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892
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April 2, 2018
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ANCOM-BC2 paired samples analysis
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2
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40
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September 27, 2024
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Can I use DESEQ2 for differential abundance analysis between two groups of samples without replicates
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1
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48
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August 21, 2024
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Lefse assign a taxa present in more number of samples in another group to represent a group in which it occurs in fewer number of samples
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4
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60
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August 21, 2024
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Statistical analysis from .qza data or .qzv data
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5
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31
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August 20, 2024
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ANCOMBC2 in R Error: Estimation failed for the following covariates:
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2
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32
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September 7, 2024
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MICOM ERROR:All numerical optimizations failed. This indicates a problem with the solver or numerical instabilities. Check that you have CPLEX or Gurobi installed. You may also increase the abundance cutoff to create simpler models.
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2
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242
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August 2, 2024
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IndexError: index 0 is out of bounds for axis 0 with size 0
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6
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681
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August 2, 2024
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make_taxa_barplot prune taxa
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5
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30
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July 29, 2024
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How to get the KO count from predicted functional profiles
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1
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121
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July 28, 2024
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Open Tree of Life in Qiime2
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1
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316
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July 28, 2024
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How to select differential abundant ASVs/ Keggs from ancombc2 for enrichment analysis
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3
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756
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July 28, 2024
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Strange adapters question before running QIIME2
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1
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51
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July 28, 2024
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csvlens, for interacting with metadata (and other csv/tsv on the command line)
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1
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208
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July 25, 2024
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Adonis2 (physeq) and Qiime2 beta-significance producing very different results
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2
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57
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July 25, 2024
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Duplicate of KOs in function prediction with picrust2 or tax4fun
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1
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143
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July 25, 2024
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picrust2 nsti table
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1
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123
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July 25, 2024
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.table format conversion to .csv
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1
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207
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July 25, 2024
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converting .bam to .fastq
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3
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65
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July 9, 2024
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Training Silva 138 data base to use in qiime1
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1
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42
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July 3, 2024
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I am having problems with the Aldex2 effect function. Can anyone help me please?
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1
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44
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July 2, 2024
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Rename sample IDs within fastq.gz files
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4
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221
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June 29, 2024
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Creating a relative abundance bar plot in R with qiime2 data
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5
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494
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July 27, 2024
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Failure to download BUSCO DB
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3
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103
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July 21, 2024
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qiime2R unable to access index for repository when downloading
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4
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96
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June 12, 2024
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installing lefse on Mac M1 laptop
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6
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169
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May 21, 2024
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Pie chart in R revising to match the segment
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3
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176
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May 17, 2024
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Cutadapt - trimming adaptor and primer sequences
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3
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155
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June 11, 2024
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Question regarding TestPrimer download format
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2
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140
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May 9, 2024
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keep getting error when installing Lefse on Mac M1, python 2.7.15
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10
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272
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June 9, 2024
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