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About the Other Bioinformatics Tools category
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0
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452
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April 2, 2018
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ggplot: coloring pcoa plot.
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6
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59
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November 26, 2021
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IQTREE boottrees file
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0
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11
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November 26, 2021
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Error with biom convert: %s does not appear to be a BIOM file!
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8
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40
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November 26, 2021
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Unable to Load shannon_vector.qza into r
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5
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37
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November 24, 2021
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ggplot Relative abundance_Out of 100%
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3
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51
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November 22, 2021
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Making alpha diversity Boxplots in R using .qza files from Qiime2 core-metrics-results
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6
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114
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November 19, 2021
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Issue with using summarize_otu_distributions.py (from Earth Microbiome Project) on biom table exported from Qiime2
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4
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47
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October 29, 2021
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Problem preparing Q2 data for use with BugBase
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2
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31
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October 28, 2021
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snakemake error while running taxa barplot
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2
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35
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October 27, 2021
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demultiplexing usearch
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1
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35
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November 23, 2021
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Exporting otu_table() from phyloseq into either biom or text format
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5
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968
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October 15, 2021
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How to export table.qza and metadata to Decontam
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0
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37
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October 12, 2021
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How to make pcoa biplot in R using q2-deicode ordination
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18
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4012
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October 6, 2021
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Question about ASV abundance
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6
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95
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October 23, 2021
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Headers removed when importing phyloseq object for decontam
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8
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1259
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September 21, 2021
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Need help with Rpath
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3
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57
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October 22, 2021
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LEfSe after QIIME2 to test at all taxonomic levels
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22
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1856
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August 2, 2021
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Include taxonomy rank in OTU table
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1
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95
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August 5, 2021
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qiime1.9.1 pip install fails "Title seems unclear, most of the words contain the same letters over and over?"
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3
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143
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July 12, 2021
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dada2 "remove primers" PacBio CSS Issue
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7
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147
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July 6, 2021
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Reference data_taxonomy
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20
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257
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July 1, 2021
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SCNIC results interpretation
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1
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75
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July 29, 2021
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qiime2r: % explained variance in PCoA plot
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7
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892
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June 8, 2021
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trimming read files containing a mixture of forward and reverse primers
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4
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164
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June 7, 2021
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QIIME 1 Installation
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5
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3294
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June 7, 2021
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LeFSE after Qiime2 for quantitative analysis (no subclass)
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0
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175
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June 6, 2021
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box plot for UniFrac analysis
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3
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128
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July 5, 2021
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Decontamination Method
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2
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200
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May 29, 2021
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Rarefaction after collapsing to genus level
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2
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98
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June 27, 2021
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