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About the Other Bioinformatics Tools category
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0
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896
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April 2, 2018
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Placing filtered ASV sequences into guide tree, per clade
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3
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24
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January 10, 2025
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ggplot2: Relative Abundances Whisker Plot for Individual Phyla across samples
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5
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29
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December 25, 2024
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qiime2R IRanges installation issue
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6
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1201
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December 13, 2024
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Add taxonomy to biom file
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3
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27
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January 10, 2025
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Error messages after cutadapt, but got trimmed files.
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5
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36
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December 8, 2024
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Converting QIIME 2 Output to VALENCIA Format (ASV Taxon and Read Count Table)
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12
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85
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December 5, 2024
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qiime2R unable to access index for repository when downloading
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10
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154
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October 30, 2024
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downloading qiita 10317, and analysis for multiple files
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1
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22
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October 28, 2024
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ANCOM-BC2 paired samples analysis
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2
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113
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September 27, 2024
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Can I use DESEQ2 for differential abundance analysis between two groups of samples without replicates
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1
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116
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August 21, 2024
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Lefse assign a taxa present in more number of samples in another group to represent a group in which it occurs in fewer number of samples
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4
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107
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August 21, 2024
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Statistical analysis from .qza data or .qzv data
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5
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35
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August 20, 2024
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ANCOMBC2 in R Error: Estimation failed for the following covariates:
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2
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73
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September 7, 2024
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MICOM ERROR:All numerical optimizations failed. This indicates a problem with the solver or numerical instabilities. Check that you have CPLEX or Gurobi installed. You may also increase the abundance cutoff to create simpler models.
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2
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245
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August 2, 2024
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IndexError: index 0 is out of bounds for axis 0 with size 0
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6
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1042
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August 2, 2024
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make_taxa_barplot prune taxa
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5
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36
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July 29, 2024
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Open Tree of Life in Qiime2
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1
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317
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July 28, 2024
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How to select differential abundant ASVs/ Keggs from ancombc2 for enrichment analysis
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3
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783
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July 28, 2024
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Strange adapters question before running QIIME2
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1
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55
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July 28, 2024
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csvlens, for interacting with metadata (and other csv/tsv on the command line)
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1
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213
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July 25, 2024
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Adonis2 (physeq) and Qiime2 beta-significance producing very different results
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2
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83
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July 25, 2024
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picrust2 nsti table
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1
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133
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July 25, 2024
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.table format conversion to .csv
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1
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208
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July 25, 2024
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converting .bam to .fastq
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3
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71
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July 9, 2024
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Training Silva 138 data base to use in qiime1
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1
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48
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July 3, 2024
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I am having problems with the Aldex2 effect function. Can anyone help me please?
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1
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58
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July 2, 2024
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Rename sample IDs within fastq.gz files
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4
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294
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June 29, 2024
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Creating a relative abundance bar plot in R with qiime2 data
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5
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870
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July 27, 2024
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Failure to download BUSCO DB
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3
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157
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July 21, 2024
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