Topics tagged feature-classifier

Topic	Replies	Views	Activity
How to perform SILVA V3 classifier training? User Support feature-classifier , taxonomy , silva	9	47	November 17, 2025
MIMt database new release!!! QIIME2 classifiers for markers 16S, ITS, 18S, 23S and 28S Other Bioinformatics Tools feature-classifier , taxonomy , ribosomal-database	0	63	November 3, 2025
Feature-clasifier V3-V4 Technical Support feature-classifier	6	88	October 21, 2025
Trained classifier output not found Technical Support dada2 , feature-classifier	7	71	October 13, 2025
Question about consensus taxonomy assignment in classify-consensus-vsearch User Support feature-classifier	9	138	September 23, 2025
Is there a pre-trained QIIME 2 classifier with full-length 16S (.qza)? Ideas and Suggestions feature-classifier	10	137	August 14, 2025
16S SRNA General Discussion feature-classifier , taxonomy , feature-table	1	69	August 2, 2025
Greengenes2 and RESCRIPt User Support feature-classifier , taxonomy , rescript , greengenes2	3	106	August 9, 2025
SILVA 138.1 classifier trained on version 2023.5 and used in 2024.5 User Support feature-classifier , rescript	3	130	August 3, 2025
Dealing with Poor Taxonomic Assignments User Support feature-classifier , taxonomy , rescript	7	100	July 26, 2025
Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt Tutorials feature-classifier , taxonomy , plugin-development , tutorials , rescript	26	62518	June 23, 2025
Request for Pre-trained SILVA V1–V3 Naive Bayes Classifier General Discussion feature-classifier	3	66	July 20, 2025
Shotgun sequencing of Fungi - UNITE or KRAKEN2 General Discussion feature-classifier , taxonomy , its , fungi	1	60	June 11, 2025
SILVA 138.2 classifier User Support feature-classifier , silva	3	229	June 28, 2025
Classifier code is running without a result Technical Support feature-classifier	3	40	June 21, 2025
Classify the phylum of d__Eukaryota;__ User Support feature-classifier , taxonomy , galaxy	7	96	June 21, 2025
Inconsitent taxonomic classification User Support feature-classifier	6	88	June 16, 2025
pre-trained UNITE ITS classifiers for QIIME 2024.10 (and older!) Data resources feature-classifier , taxonomy , its , fungi , unite	12	7826	May 9, 2025
Greengenes2 2024.09 phylogenetic tree Technical Support feature-classifier , taxonomy	7	181	June 2, 2025
How does the sklearn classifier handle ambiguous bases? General Discussion feature-classifier , naivebayes	3	72	May 28, 2025
Almost all Reads are unclassified - custom 18S V4 classifier Technical Support feature-classifier , taxonomy , rescript	13	193	May 26, 2025
[Feature Classifier Error] Not enough value to unpack Technical Support feature-classifier	3	33	May 20, 2025
SILVA classifier full lenght vs V3V4 User Support feature-classifier , classifier	5	326	May 17, 2025
low proportion of identified ITS - OTU features Technical Support dada2 , feature-classifier , taxonomy , otus	3	72	April 28, 2025
SILVA vs PR2 database using qiime2 General Discussion feature-classifier , taxonomy , silva , 18s	1	184	March 19, 2025
Comparison of OTU Identifications with Silva 138.1 and Greengenes 2022.10 databases General Discussion feature-classifier , greengenes , silva	7	183	March 16, 2025
Unable to find all taxon as a result of taxanomic analysis User Support dada2 , feature-classifier , taxonomy , feature-table	3	51	April 13, 2025
ASV with missing taxonomic annotation General Discussion feature-classifier , taxonomy	2	105	March 11, 2025
Taxonomy file has only 30 features User Support feature-classifier , taxonomy	3	49	April 3, 2025
Converting Ion Torrent Amplicon Data (V3-V4) to PICRUSt2-Compatible Files (.fna and .biom) User Support dada2 , import , demux , feature-classifier , feature-table , picrust	8	121	April 1, 2025