Topics tagged feature-classifier

Topic	Replies	Views	Activity
Question about consensus taxonomy assignment in classify-consensus-vsearch User Support feature-classifier	8	93	August 21, 2025
Is there a pre-trained QIIME 2 classifier with full-length 16S (.qza)? Ideas and Suggestions feature-classifier	10	73	August 14, 2025
16S SRNA General Discussion feature-classifier , taxonomy , feature-table	1	28	August 2, 2025
Greengenes2 and RESCRIPt User Support feature-classifier , taxonomy , rescript , greengenes2	3	67	August 9, 2025
SILVA 138.1 classifier trained on version 2023.5 and used in 2024.5 User Support feature-classifier , rescript	3	88	August 3, 2025
Dealing with Poor Taxonomic Assignments User Support feature-classifier , taxonomy , rescript	7	71	July 26, 2025
Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt Tutorials feature-classifier , taxonomy , plugin-development , tutorials , rescript	26	60816	June 23, 2025
Request for Pre-trained SILVA V1–V3 Naive Bayes Classifier General Discussion feature-classifier	3	54	July 20, 2025
Shotgun sequencing of Fungi - UNITE or KRAKEN2 General Discussion feature-classifier , taxonomy , its , fungi	1	31	June 11, 2025
SILVA 138.2 classifier User Support feature-classifier , silva	3	158	June 28, 2025
Classifier code is running without a result Technical Support feature-classifier	3	24	June 21, 2025
Classify the phylum of d__Eukaryota;__ User Support feature-classifier , taxonomy , galaxy	7	81	June 21, 2025
Inconsitent taxonomic classification User Support feature-classifier	6	66	June 16, 2025
pre-trained UNITE ITS classifiers for QIIME 2024.10 (and older!) Data resources feature-classifier , taxonomy , its , fungi , unite	12	7317	May 9, 2025
Greengenes2 2024.09 phylogenetic tree Technical Support feature-classifier , taxonomy	7	135	June 2, 2025
How does the sklearn classifier handle ambiguous bases? General Discussion feature-classifier , naivebayes	3	62	May 28, 2025
Almost all Reads are unclassified - custom 18S V4 classifier Technical Support feature-classifier , taxonomy , rescript	13	164	May 26, 2025
[Feature Classifier Error] Not enough value to unpack Technical Support feature-classifier	3	25	May 20, 2025
SILVA classifier full lenght vs V3V4 User Support feature-classifier , classifier	5	181	May 17, 2025
low proportion of identified ITS - OTU features Technical Support dada2 , feature-classifier , taxonomy , otus	3	63	April 28, 2025
SILVA vs PR2 database using qiime2 General Discussion feature-classifier , taxonomy , silva , 18s	1	125	March 19, 2025
Comparison of OTU Identifications with Silva 138.1 and Greengenes 2022.10 databases General Discussion feature-classifier , greengenes , silva	7	129	March 16, 2025
Unable to find all taxon as a result of taxanomic analysis User Support dada2 , feature-classifier , taxonomy , feature-table	3	27	April 13, 2025
ASV with missing taxonomic annotation General Discussion feature-classifier , taxonomy	2	76	March 11, 2025
Taxonomy file has only 30 features User Support feature-classifier , taxonomy	3	39	April 3, 2025
Converting Ion Torrent Amplicon Data (V3-V4) to PICRUSt2-Compatible Files (.fna and .biom) User Support dada2 , import , demux , feature-classifier , feature-table , picrust	8	108	April 1, 2025
Identification of Acanthamoeba in 18S rDNA analysis General Discussion feature-classifier	1	19	February 24, 2025
Taxonomic Classification Only Reaching Genus Level (6) – Need Help with Deeper Classification Technical Support dada2 , feature-classifier , taxonomy	4	149	March 21, 2025
qiime tools export -- The extraction result is incomplete User Support feature-classifier	2	15	March 15, 2025
qiime feature-classifier extract-reads successfully extracts different number of reads each time User Support feature-classifier	4	96	March 10, 2025