Topics tagged feature-classifier

Topic	Replies	Views	Activity
Greengenes2 and RESCRIPt User Support feature-classifier , taxonomy , rescript , greengenes2	2	28	July 9, 2025
SILVA 138.1 classifier trained on version 2023.5 and used in 2024.5 User Support feature-classifier , rescript	2	53	July 3, 2025
Dealing with Poor Taxonomic Assignments User Support feature-classifier , taxonomy , rescript	6	55	June 24, 2025
Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt Tutorials feature-classifier , taxonomy , plugin-development , tutorials , rescript	26	59989	June 23, 2025
Request for Pre-trained SILVA V1–V3 Naive Bayes Classifier General Discussion feature-classifier	2	33	June 18, 2025
Shotgun sequencing of Fungi - UNITE or KRAKEN2 General Discussion feature-classifier , taxonomy , its , fungi	1	28	June 11, 2025
SILVA 138.2 classifier User Support feature-classifier , silva	3	114	June 28, 2025
Classifier code is running without a result Technical Support feature-classifier	3	23	June 21, 2025
Classify the phylum of d__Eukaryota;__ User Support feature-classifier , taxonomy , galaxy	7	78	June 21, 2025
Inconsitent taxonomic classification User Support feature-classifier	6	62	June 16, 2025
pre-trained UNITE ITS classifiers for QIIME 2024.10 (and older!) Data resources feature-classifier , taxonomy , its , fungi , unite	12	7144	May 9, 2025
Greengenes2 2024.09 phylogenetic tree Technical Support feature-classifier , taxonomy	7	112	June 2, 2025
How does the sklearn classifier handle ambiguous bases? General Discussion feature-classifier , naivebayes	3	60	May 28, 2025
Almost all Reads are unclassified - custom 18S V4 classifier Technical Support feature-classifier , taxonomy , rescript	13	157	May 26, 2025
[Feature Classifier Error] Not enough value to unpack Technical Support feature-classifier	3	25	May 20, 2025
SILVA classifier full lenght vs V3V4 User Support feature-classifier , classifier	5	142	May 17, 2025
low proportion of identified ITS - OTU features Technical Support dada2 , feature-classifier , taxonomy , otus	3	58	April 28, 2025
SILVA vs PR2 database using qiime2 General Discussion feature-classifier , taxonomy , silva , 18s	1	96	March 19, 2025
Comparison of OTU Identifications with Silva 138.1 and Greengenes 2022.10 databases General Discussion feature-classifier , greengenes , silva	7	107	March 16, 2025
Unable to find all taxon as a result of taxanomic analysis User Support dada2 , feature-classifier , taxonomy , feature-table	3	27	April 13, 2025
ASV with missing taxonomic annotation General Discussion feature-classifier , taxonomy	2	66	March 11, 2025
Taxonomy file has only 30 features User Support feature-classifier , taxonomy	3	37	April 3, 2025
Converting Ion Torrent Amplicon Data (V3-V4) to PICRUSt2-Compatible Files (.fna and .biom) User Support dada2 , import , demux , feature-classifier , feature-table , picrust	8	108	April 1, 2025
Identification of Acanthamoeba in 18S rDNA analysis General Discussion feature-classifier	1	19	February 24, 2025
Taxonomic Classification Only Reaching Genus Level (6) – Need Help with Deeper Classification Technical Support dada2 , feature-classifier , taxonomy	4	135	March 21, 2025
qiime tools export -- The extraction result is incomplete User Support feature-classifier	2	15	March 15, 2025
qiime feature-classifier extract-reads successfully extracts different number of reads each time User Support feature-classifier	4	88	March 10, 2025
classifying sequences- Technical Support feature-classifier , taxonomy	7	67	February 21, 2025
The feature-classifier step is too time consuming User Support feature-classifier	3	30	February 19, 2025
qiime2 feature-classifier fit-classifier-naive-bayes KILLED Technical Support feature-classifier , taxonomy	2	42	February 17, 2025