Topics tagged feature-classifier

Topic	Replies	Views	Activity
pre-trained UNITE ITS classifiers for QIIME 2024.10 (and older!) Data resources feature-classifier , unite , taxonomy , fungi , its	12	6712	May 9, 2025
Greengenes2 2024.09 phylogenetic tree Technical Support taxonomy , feature-classifier	6	51	May 2, 2025
How does the sklearn classifier handle ambiguous bases? General Discussion feature-classifier , naivebayes	2	53	April 27, 2025
Almost all Reads are unclassified - custom 18S V4 classifier Technical Support taxonomy , rescript , feature-classifier	12	92	April 25, 2025
[Feature Classifier Error] Not enough value to unpack Technical Support feature-classifier	2	20	April 19, 2025
SILVA classifier full lenght vs V3V4 User Support classifier , feature-classifier	4	64	April 16, 2025
low proportion of identified ITS - OTU features Technical Support dada2 , otus , taxonomy , feature-classifier	3	53	April 28, 2025
SILVA vs PR2 database using qiime2 General Discussion taxonomy , silva , 18s , feature-classifier	1	51	March 19, 2025
Comparison of OTU Identifications with Silva 138.1 and Greengenes 2022.10 databases General Discussion greengenes , silva , feature-classifier	7	66	March 16, 2025
Unable to find all taxon as a result of taxanomic analysis User Support dada2 , taxonomy , feature-table , feature-classifier	3	26	April 13, 2025
ASV with missing taxonomic annotation General Discussion taxonomy , feature-classifier	2	50	March 11, 2025
Taxonomy file has only 30 features User Support taxonomy , feature-classifier	3	31	April 3, 2025
Converting Ion Torrent Amplicon Data (V3-V4) to PICRUSt2-Compatible Files (.fna and .biom) User Support demux , dada2 , picrust , feature-table , import , feature-classifier	8	100	April 1, 2025
Identification of Acanthamoeba in 18S rDNA analysis General Discussion feature-classifier	1	17	February 24, 2025
Taxonomic Classification Only Reaching Genus Level (6) – Need Help with Deeper Classification Technical Support dada2 , taxonomy , feature-classifier	4	117	March 21, 2025
qiime tools export -- The extraction result is incomplete User Support feature-classifier	2	15	March 15, 2025
Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt Tutorials plugin-development , feature-classifier , tutorials , taxonomy , rescript	24	58451	February 8, 2025
qiime feature-classifier extract-reads successfully extracts different number of reads each time User Support feature-classifier	4	77	March 10, 2025
classifying sequences- Technical Support taxonomy , feature-classifier	7	52	February 21, 2025
The feature-classifier step is too time consuming User Support feature-classifier	3	25	February 19, 2025
qiime2 feature-classifier fit-classifier-naive-bayes KILLED Technical Support taxonomy , feature-classifier	2	35	February 17, 2025
Strange error while making classifier Technical Support feature-classifier	3	41	February 17, 2025
Unexpected taxonomic assignment results from two classifiers trained on nearly identical sequences Technical Support feature-classifier	16	107	February 16, 2025
How to train a GTDB SSU classifier using RESCRIPt Community Contributions tutorial , ssu , taxonomy , feature-classifier , rescript , gtdb	5	1995	January 13, 2025
Is there an issue with the 2024.5 silva138-99-nb classifier? User Support silva , feature-classifier	5	120	February 7, 2025
Assistance with Genus-Level Classification and Filtering ASV/OTUs User Support taxonomy , feature-classifier , qiime2r	17	225	February 13, 2025
How to train a UNITE classifier using RESCRIPt Tutorials tutorial , taxonomy , its , feature-classifier , rescript , unite	11	1548	January 3, 2025
Taxonomic asignation using non-16 region (nosZ) User Support feature-classifier	2	21	January 27, 2025
Problem with vizualization of SSU in bar plot User Support ssu , barplot , silva , feature-classifier	8	59	January 14, 2025
gg-13-8-99-515-806-nb-classifier.qza is not up-to-date Technical Support greengenes2 , greengenes , feature-classifier	9	159	January 13, 2025