Topics tagged feature-classifier

Topic	Replies	Views	Activity
MIMt database new release!!! QIIME2 classifiers for markers 16S, ITS, 18S, 23S and 28S Other Bioinformatics Tools feature-classifier , taxonomy , ribosomal-database	0	17	November 3, 2025
Feature-clasifier V3-V4 Technical Support feature-classifier	6	65	October 21, 2025
Trained classifier output not found Technical Support dada2 , feature-classifier	7	51	October 13, 2025
Question about consensus taxonomy assignment in classify-consensus-vsearch User Support feature-classifier	9	117	September 23, 2025
Is there a pre-trained QIIME 2 classifier with full-length 16S (.qza)? Ideas and Suggestions feature-classifier	10	125	August 14, 2025
16S SRNA General Discussion feature-classifier , taxonomy , feature-table	1	54	August 2, 2025
Greengenes2 and RESCRIPt User Support feature-classifier , taxonomy , rescript , greengenes2	3	94	August 9, 2025
SILVA 138.1 classifier trained on version 2023.5 and used in 2024.5 User Support feature-classifier , rescript	3	116	August 3, 2025
Dealing with Poor Taxonomic Assignments User Support feature-classifier , taxonomy , rescript	7	83	July 26, 2025
Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt Tutorials feature-classifier , taxonomy , plugin-development , tutorials , rescript	26	62195	June 23, 2025
Request for Pre-trained SILVA V1–V3 Naive Bayes Classifier General Discussion feature-classifier	3	59	July 20, 2025
Shotgun sequencing of Fungi - UNITE or KRAKEN2 General Discussion feature-classifier , taxonomy , its , fungi	1	44	June 11, 2025
SILVA 138.2 classifier User Support feature-classifier , silva	3	201	June 28, 2025
Classifier code is running without a result Technical Support feature-classifier	3	31	June 21, 2025
Classify the phylum of d__Eukaryota;__ User Support feature-classifier , taxonomy , galaxy	7	88	June 21, 2025
Inconsitent taxonomic classification User Support feature-classifier	6	74	June 16, 2025
pre-trained UNITE ITS classifiers for QIIME 2024.10 (and older!) Data resources feature-classifier , taxonomy , its , fungi , unite	12	7677	May 9, 2025
Greengenes2 2024.09 phylogenetic tree Technical Support feature-classifier , taxonomy	7	166	June 2, 2025
How does the sklearn classifier handle ambiguous bases? General Discussion feature-classifier , naivebayes	3	65	May 28, 2025
Almost all Reads are unclassified - custom 18S V4 classifier Technical Support feature-classifier , taxonomy , rescript	13	174	May 26, 2025
[Feature Classifier Error] Not enough value to unpack Technical Support feature-classifier	3	26	May 20, 2025
SILVA classifier full lenght vs V3V4 User Support feature-classifier , classifier	5	287	May 17, 2025
low proportion of identified ITS - OTU features Technical Support dada2 , feature-classifier , taxonomy , otus	3	64	April 28, 2025
SILVA vs PR2 database using qiime2 General Discussion feature-classifier , taxonomy , silva , 18s	1	168	March 19, 2025
Comparison of OTU Identifications with Silva 138.1 and Greengenes 2022.10 databases General Discussion feature-classifier , greengenes , silva	7	154	March 16, 2025
Unable to find all taxon as a result of taxanomic analysis User Support dada2 , feature-classifier , taxonomy , feature-table	3	33	April 13, 2025
ASV with missing taxonomic annotation General Discussion feature-classifier , taxonomy	2	98	March 11, 2025
Taxonomy file has only 30 features User Support feature-classifier , taxonomy	3	39	April 3, 2025
Converting Ion Torrent Amplicon Data (V3-V4) to PICRUSt2-Compatible Files (.fna and .biom) User Support dada2 , import , demux , feature-classifier , feature-table , picrust	8	109	April 1, 2025
Identification of Acanthamoeba in 18S rDNA analysis General Discussion feature-classifier	1	23	February 24, 2025