Topics tagged feature-classifier

Topic	Replies	Views	Activity
Merging after denoising step Technical Support dada2 , demux , feature-classifier , taxonomy , feature-table	10	40	September 6, 2024
Unclassified at the phylum level General Discussion feature-classifier , taxonomy , greengenes2	5	60	September 4, 2024
For QIIME 2 2024.5, does the order of the sequences matter for feature-classifier classify-sklearn? Technical Support feature-classifier , taxonomy	4	32	August 26, 2024
qiime feature-classifier classify-sklearn low confidence despite 100% identity User Support feature-classifier , taxonomy , rescript	1	15	August 21, 2024
Using silva-138 pre-trained classifier User Support feature-classifier , taxonomy	6	253	August 12, 2024
comparative analysis of 16S rRNA sequencing data of different runs User Support feature-classifier	3	88	August 9, 2024
Issue with qiime rescript evaluate-fit-classifier - wrong classification User Support feature-classifier , taxonomy	4	27	August 24, 2024
How to train a GTDB SSU classifier using RESCRIPt Community Contributions feature-classifier , taxonomy , tutorial , rescript , ssu , gtdb	4	1602	July 23, 2024
Taxonomic Data: Using 18S-Nemabase in Qiime2 instead of Silva? General Discussion feature-classifier , taxonomy	18	649	July 23, 2024
help: training ITS classifier User Support feature-classifier	9	58	August 15, 2024
problem training taxonomic Naive Bayes classifier with SILVA database Technical Support feature-classifier , rescript	8	188	August 11, 2024
Training of naivebyes classifier on Qiime databse Technical Support feature-classifier , taxonomy	3	44	August 5, 2024
qiime2-metagenome-2024.5 feature-classifier User Support feature-classifier , metagenomics	6	121	August 2, 2024
Some taxonomic units, such as class, order, and species, cannot be classified Technical Support feature-classifier , taxonomy , feature-table	3	82	August 2, 2024
Classify Consensus Blast error with nt Database Technical Support feature-classifier , taxonomy	2	55	July 30, 2024
Feature-classifier classify-sklearn killed Technical Support feature-classifier	7	104	July 22, 2024
How to train the classifier for V3-V4 region with 99% identity using full length seuqnces from new relase of GreenGenes-2022?? Community Plugin Support feature-classifier , taxonomy , greengenes	9	1009	June 20, 2024
Plugin effor from feature-classifier: BLAST6 file is empty. User Support feature-classifier , taxonomy	6	97	July 14, 2024
Issues with taxonomic classification UNITE 9.0 and 10.0 User Support feature-classifier , taxonomy , its , unite	3	184	July 7, 2024
bitscore and evalue after running qiime feature-classifier classify-consensus-vsearch User Support feature-classifier , taxonomy	4	113	June 23, 2024
qiime feature-classifier classify-sklearn Missing option Technical Support feature-classifier , taxonomy	5	113	June 24, 2024
Available: Pre-trained classifier of V3-V4 (341F, 805R) region with gg_99 Community Contributions feature-classifier	12	8812	May 17, 2024
How to train a UNITE classifier using RESCRIPt Tutorials feature-classifier , taxonomy , tutorial , its , unite , rescript	8	1014	May 17, 2024
The parameter perc_identity for classify_consensus_vsearch affects runtime? Technical Support feature-classifier , taxonomy	9	98	June 16, 2024
classify-consensus-blast -- BLAST6 file is empty General Discussion feature-classifier	1	75	May 13, 2024
16S analysis using DADA2 and self-trained classifier fails only with large amounts of samples Technical Support dada2 , feature-classifier	4	150	June 12, 2024
Which file to use to train the classifier? User Support feature-classifier , taxonomy	3	145	June 9, 2024
Killed qiime feature-classifier fit-classifier-naive-bayes Technical Support feature-classifier	5	145	June 9, 2024
Trouble with self-trained 18S Classifier - not assigning lower taxa levels User Support feature-classifier , rescript	3	149	June 7, 2024
Classifer based on GTDB having issues with scikit-learn versions User Support feature-classifier , gtdb	2	107	June 7, 2024