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SILVA vs PR2 database using qiime2
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1
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52
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March 19, 2025
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Comparison of OTU Identifications with Silva 138.1 and Greengenes 2022.10 databases
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7
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68
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March 16, 2025
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Is there an issue with the 2024.5 silva138-99-nb classifier?
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5
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123
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February 7, 2025
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Problem with vizualization of SSU in bar plot
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8
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59
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January 14, 2025
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Not able to find E. coli in my taxonomy file
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3
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46
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December 5, 2024
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feature-classifier stopped with "Killed"
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2
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36
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November 24, 2024
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Make OTU cluster from SILVAdatabase
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3
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54
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November 2, 2024
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Interpreting Silva Bacterial Taxonomy (Incertae Sedis)
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2
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179
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September 24, 2024
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Reconciling 16s Databases in a Single Pipeline
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5
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114
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August 28, 2024
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Training Silva 138 data base to use in qiime1
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1
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60
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July 3, 2024
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Taxonomic Classification Issues in Meiofauna Analysis using QIIME2 and SILVA 138 and 138.1
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4
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95
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June 30, 2024
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Train the Silva database (Qiime2) by extracting two types of primers: Region v3-v4 and v4 of the 16S rRNA
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3
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426
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June 19, 2024
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How can I set the parameters of feature-classifier extract-reads ?
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1
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203
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January 30, 2024
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Greengenes assigning wrong family to genus level
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9
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432
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February 26, 2024
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Is there a pretrainer classifer for silva 138.1 specifically for 515-806 V4 sequences available on this website?
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1
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291
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December 15, 2023
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"[Errno 28] No space left on device" during Silva-based taxonomy classification
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17
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298
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January 16, 2024
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Questions about SILVA classifier for v3v4
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2
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320
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January 1, 2024
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fit classifier naives bayes Silva 138 database
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6
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429
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November 23, 2023
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how to compare SILVA 138 taxonomy and NCBI taxonomy
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3
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375
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August 22, 2023
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extracting amplicon region from alignment
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3
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414
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September 2, 2023
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Update of Greengenes
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1
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779
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July 10, 2023
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classify-sklearn not working without error message
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3
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308
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August 6, 2023
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Understanding options for assigning taxonomy
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2
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559
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May 16, 2023
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Taxonomy assignment using Silva 138
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17
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8065
|
April 5, 2023
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What does mean 'plant-corpus'?
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2
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257
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March 9, 2023
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Could "chloroplast" sequences actually be mitochondrial?
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2
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466
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April 9, 2023
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problem with feature-classifier classify-consensus-vsearch
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7
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864
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March 17, 2023
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How to interpret SILVA taxonomic classifications
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2
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573
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February 9, 2023
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Downloading SILVA database
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2
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3274
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January 30, 2023
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Redoing analysis from QIIME 1, Archaea has mostly disappeared
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5
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530
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November 24, 2022
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