Topics tagged feature-table

Topic	Replies	Views	Activity
Advice in best practice for handling multiple sequencing runs and subset analyses in QIIME 2 (DADA2) General Discussion dada2 , feature-table	2	23	January 16, 2026
How to perform filtering step for forward read only analysis? User Support filtering , feature-table , filter-features , filter-samples	13	120	December 31, 2025
Filter table : taxonomy Technical Support feature-table	2	37	January 10, 2026
Questions about performing quality control with dada2 and generating a feature table User Support dada2 , feature-table	3	30	December 30, 2025
Guidance for feature filtering step of qiime2 User Support feature-table , filter-features	5	78	December 20, 2025
Converting 16S V3–V4 ASV reads to absolute copy numbers (qPCR / spike-in calibration?) General Discussion dada2 , feature-table	3	83	October 9, 2025
16S SRNA General Discussion feature-classifier , taxonomy , feature-table	1	76	August 2, 2025
Merging qiime2 sample metadata with exterior taxonomic classifications General Discussion taxonomy , feature-table	1	48	July 13, 2025
Feature table and representative sequences for downstream analyses General Discussion feature-table	2	38	July 13, 2025
feature-table summarize plug in error and metadata length of index Technical Support metadata , feature-table	6	81	June 29, 2025
Feature table with core features for beta diversity analysis User Support feature-table , core-features	3	57	June 9, 2025
Alpha diversity with filtered raw data or unfiltered raw data General Discussion dada2 , r , feature-table , alpha	1	89	April 24, 2025
biom add-metadata: Error in biom file while adding Taxonomy Other Bioinformatics Tools taxonomy , feature-table	4	45	May 8, 2025
Unable to find all taxon as a result of taxanomic analysis User Support dada2 , feature-classifier , taxonomy , feature-table	3	54	April 13, 2025
OTU Tables Relative Frequency to Relative Abundance General Discussion feature-table , relative-frequency	9	187	March 4, 2025
Converting Ion Torrent Amplicon Data (V3-V4) to PICRUSt2-Compatible Files (.fna and .biom) User Support dada2 , import , demux , feature-classifier , feature-table , picrust	8	128	April 1, 2025
Corrupted BIOM export? Technical Support filtering , export , feature-table	3	71	March 28, 2025
Big data analysis in QIIME2: how to obtain the level-7.csv Technical Support taxonomy , feature-table	2	54	March 22, 2025
setting --p-min-frequency User Support feature-table	3	76	January 17, 2025
Not able to find E. coli in my taxonomy file Silva taxonomy , feature-table , silva	3	65	December 5, 2024
16S metagenomic analsys Technical Support feature-classifier , taxonomy , feature-table	2	86	December 15, 2024
Dada2 unable to run User Support dada2 , demux , feature-table	2	48	November 30, 2024
Advice on feature table filtering General Discussion dada2 , feature-table	1	60	October 28, 2024
Can i use taxa collapse table for network analysis?? User Support feature-table , network	7	85	November 25, 2024
Removal of Overrepresented sequences from 16S metagenomic sequences User Support dada2 , feature-table , fastqc	11	414	November 1, 2024
Merging after denoising step Technical Support dada2 , demux , feature-classifier , taxonomy , feature-table	15	296	October 12, 2024
Manually Adding Positive Controls to classifier or reference database General Discussion taxonomy , feature-table , rescript	4	516	August 30, 2024
Lost samples after DADA2 Technical Support dada2 , feature-table	4	62	September 7, 2024
.table format conversion to .csv Other Bioinformatics Tools import , feature-table	1	245	July 25, 2024
I am having problems with the Aldex2 effect function. Can anyone help me please? Other Bioinformatics Tools import , feature-table , aldex2	1	115	July 2, 2024