Topics tagged feature-table

Topic	Replies	Views	Activity
Converting 16S V3–V4 ASV reads to absolute copy numbers (qPCR / spike-in calibration?) General Discussion dada2 , feature-table	3	44	October 9, 2025
16S SRNA General Discussion feature-classifier , taxonomy , feature-table	1	53	August 2, 2025
Merging qiime2 sample metadata with exterior taxonomic classifications General Discussion taxonomy , feature-table	1	25	July 13, 2025
Feature table and representative sequences for downstream analyses General Discussion feature-table	2	24	July 13, 2025
feature-table summarize plug in error and metadata length of index Technical Support metadata , feature-table	6	49	June 29, 2025
Feature table with core features for beta diversity analysis User Support feature-table , core-features	3	40	June 9, 2025
Alpha diversity with filtered raw data or unfiltered raw data General Discussion dada2 , r , feature-table , alpha	1	68	April 24, 2025
biom add-metadata: Error in biom file while adding Taxonomy Other Bioinformatics Tools taxonomy , feature-table	4	29	May 8, 2025
Unable to find all taxon as a result of taxanomic analysis User Support dada2 , feature-classifier , taxonomy , feature-table	3	33	April 13, 2025
OTU Tables Relative Frequency to Relative Abundance General Discussion feature-table , relative-frequency	9	113	March 4, 2025
Converting Ion Torrent Amplicon Data (V3-V4) to PICRUSt2-Compatible Files (.fna and .biom) User Support dada2 , import , demux , feature-classifier , feature-table , picrust	8	109	April 1, 2025
Corrupted BIOM export? Technical Support filtering , export , feature-table	3	47	March 28, 2025
Big data analysis in QIIME2: how to obtain the level-7.csv Technical Support taxonomy , feature-table	2	35	March 22, 2025
setting --p-min-frequency User Support feature-table	3	66	January 17, 2025
Not able to find E. coli in my taxonomy file General Discussion taxonomy , feature-table , silva	3	53	December 5, 2024
16S metagenomic analsys Technical Support feature-classifier , taxonomy , feature-table	2	82	December 15, 2024
Dada2 unable to run User Support dada2 , demux , feature-table	2	37	November 30, 2024
Advice on feature table filtering General Discussion dada2 , feature-table	1	48	October 28, 2024
Can i use taxa collapse table for network analysis?? User Support feature-table , network	7	76	November 25, 2024
Removal of Overrepresented sequences from 16S metagenomic sequences User Support dada2 , feature-table , fastqc	11	331	November 1, 2024
Merging after denoising step Technical Support dada2 , demux , feature-classifier , taxonomy , feature-table	15	256	October 12, 2024
Manually Adding Positive Controls to classifier or reference database General Discussion taxonomy , feature-table , rescript	4	496	August 30, 2024
Lost samples after DADA2 Technical Support dada2 , feature-table	4	43	September 7, 2024
.table format conversion to .csv Other Bioinformatics Tools import , feature-table	1	227	July 25, 2024
I am having problems with the Aldex2 effect function. Can anyone help me please? Other Bioinformatics Tools import , feature-table , aldex2	1	99	July 2, 2024
Some taxonomic units, such as class, order, and species, cannot be classified Technical Support feature-classifier , taxonomy , feature-table	3	104	August 2, 2024
Different --p-min-frequency arguments result in different order of importance of the taxonomic groups User Support taxonomy , feature-table	3	82	August 1, 2024
Plugin error from dada2, 16S paired-end fastq files can't generate feature table through dada2 Technical Support dada2 , feature-table	10	145	July 26, 2024
How to interpret the 'qiime feature-table core-features' output User Support feature-table	2	209	July 19, 2024
Merging species derived from spiked species General Discussion dada2 , taxonomy , feature-table	0	99	June 3, 2024