Topics tagged feature-table

Topic	Replies	Views	Activity
Feature table and representative sequences for downstream analyses General Discussion feature-table	1	12	June 11, 2025
feature-table summarize plug in error and metadata length of index Technical Support metadata , feature-table	5	41	May 29, 2025
Feature table with core features for beta diversity analysis User Support feature-table , core-features	3	35	June 9, 2025
Alpha diversity with filtered raw data or unfiltered raw data General Discussion dada2 , r , feature-table , alpha	1	53	April 24, 2025
biom add-metadata: Error in biom file while adding Taxonomy Other Bioinformatics Tools taxonomy , feature-table	4	18	May 8, 2025
Unable to find all taxon as a result of taxanomic analysis User Support dada2 , feature-classifier , taxonomy , feature-table	3	27	April 13, 2025
OTU Tables Relative Frequency to Relative Abundance General Discussion feature-table , relative-frequency	9	65	March 4, 2025
Converting Ion Torrent Amplicon Data (V3-V4) to PICRUSt2-Compatible Files (.fna and .biom) User Support dada2 , import , demux , feature-classifier , feature-table , picrust	8	105	April 1, 2025
Corrupted BIOM export? Technical Support filtering , export , feature-table	3	38	March 28, 2025
Big data analysis in QIIME2: how to obtain the level-7.csv Technical Support taxonomy , feature-table	2	29	March 22, 2025
setting --p-min-frequency User Support feature-table	3	45	January 17, 2025
Not able to find E. coli in my taxonomy file General Discussion taxonomy , feature-table , silva	3	50	December 5, 2024
16S metagenomic analsys Technical Support feature-classifier , taxonomy , feature-table	2	72	December 15, 2024
Dada2 unable to run User Support dada2 , demux , feature-table	2	33	November 30, 2024
Advice on feature table filtering General Discussion dada2 , feature-table	1	41	October 28, 2024
Can i use taxa collapse table for network analysis?? User Support feature-table , network	7	68	November 25, 2024
Removal of Overrepresented sequences from 16S metagenomic sequences User Support dada2 , feature-table , fastqc	11	265	November 1, 2024
Merging after denoising step Technical Support dada2 , demux , feature-classifier , taxonomy , feature-table	15	216	October 12, 2024
Manually Adding Positive Controls to classifier or reference database General Discussion taxonomy , feature-table , rescript	4	493	August 30, 2024
Lost samples after DADA2 Technical Support dada2 , feature-table	4	38	September 7, 2024
.table format conversion to .csv Other Bioinformatics Tools import , feature-table	1	216	July 25, 2024
I am having problems with the Aldex2 effect function. Can anyone help me please? Other Bioinformatics Tools import , feature-table , aldex2	1	88	July 2, 2024
Some taxonomic units, such as class, order, and species, cannot be classified Technical Support feature-classifier , taxonomy , feature-table	3	101	August 2, 2024
Different --p-min-frequency arguments result in different order of importance of the taxonomic groups User Support taxonomy , feature-table	3	77	August 1, 2024
Plugin error from dada2, 16S paired-end fastq files can't generate feature table through dada2 Technical Support dada2 , feature-table	10	128	July 26, 2024
How to interpret the 'qiime feature-table core-features' output User Support feature-table	2	187	July 19, 2024
Merging species derived from spiked species General Discussion dada2 , taxonomy , feature-table	0	96	June 3, 2024
I lost 90% features after removing singletons by '--p-min-samples 2' User Support feature-table , filter-features	6	254	July 8, 2024
Error beta rarefaction plugin Technical Support metadata , feature-table , diversity , beta	7	128	June 28, 2024
Regarding the ASV_ID in the ASV feature table User Support feature-table	3	99	June 18, 2024