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Error when collapsing at genus level: Feature IDs missing from taxonomy
|
|
4
|
27
|
October 26, 2025
|
|
How to filter or reassign taxonomic names in QIIME 2?
|
|
5
|
43
|
October 12, 2025
|
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DADA2 Filtering Error - Failed to Write Record
|
|
20
|
62
|
April 3, 2025
|
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Corrupted BIOM export?
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3
|
48
|
March 28, 2025
|
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Error filtering taxa
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4
|
39
|
March 25, 2025
|
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Filter kraken2 reports (e.g. before creating feature-tables with bracken)
|
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3
|
199
|
October 8, 2024
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Filtering features
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3
|
49
|
September 29, 2024
|
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filtering data table using CSV file
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9
|
73
|
September 3, 2024
|
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Filter specific ASVs from feature table
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|
2
|
241
|
April 20, 2024
|
|
DADA2, odd results from denoising stats (varying input passed filter, low number of reads, low % of input merged and ASVs)
|
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4
|
336
|
February 29, 2024
|
|
Abnormal high percentage of unclassified bacteria
|
|
2
|
329
|
February 12, 2024
|
|
Error message after using ReSCRIPT for filtering for homopolymers
|
|
5
|
221
|
December 23, 2023
|
|
Removal of mitochondria and chloroplast - filter sequence vs filter taxonomy
|
|
7
|
1095
|
November 18, 2023
|
|
Confirmation on code that removes Homopolymers
|
|
4
|
399
|
September 14, 2023
|
|
Error with filter-features-conditionally on picrust2 outputs
|
|
3
|
350
|
August 10, 2023
|
|
Getting low feature counts while using dada2 plugin
|
|
18
|
423
|
June 23, 2023
|
|
Filtered OTU table using spike-in mock community to get actual read count
|
|
6
|
365
|
May 21, 2023
|
|
DADA2: losing a lot of reads
|
|
7
|
615
|
April 13, 2023
|
|
LOW percentage of input merged
|
|
5
|
634
|
March 27, 2023
|
|
Filtering Samples in a Metabarcoding Dataset by Source Without Restarting the Pipeline
|
|
2
|
200
|
March 21, 2023
|
|
How to filter out contamination at samples
|
|
2
|
674
|
February 18, 2023
|
|
Is my DADA2 outputs nomarl?
|
|
3
|
416
|
January 16, 2023
|
|
Filtering phyloseq object by otu id instead of the target level
|
|
1
|
709
|
October 28, 2022
|
|
How to find sample IDs from publicly available fastq.gz
|
|
3
|
318
|
August 26, 2022
|
|
Qiime filter feature table by sequences
|
|
3
|
621
|
September 19, 2022
|
|
filtering with metada doesn't work
|
|
10
|
684
|
July 29, 2022
|
|
silva138 16S database contains eukaryota after filtering
|
|
3
|
1710
|
May 30, 2022
|
|
Results after taxonomy filtering
|
|
2
|
292
|
May 29, 2022
|
|
Importing Multiplexed Paired End Sequence With Adaptors --> Demultiplexed Sequences
|
|
4
|
1256
|
December 24, 2021
|
|
DADA2 error (same error for every try)
|
|
2
|
649
|
July 29, 2021
|