Hi, I am finding a difficulties in filtering. Here, we can filter feature table and sequences. We can also filter sequences by feature table by using
qiime feature-table filter-seqs .
But if we first filter sequences like this way,
qiime quality-control exclude-seqs \ --i-query-sequences ./rep_set-no-ecmu.qza \ --i-reference-sequences ./references/silva-138-99-seqs-515-806.qza \ --p-method blast \ --p-perc-identity 0.90 \ --p-perc-query-aligned 0.90 \ --o-sequence-hits ./hits.qza \ --o-sequence-misses ./misses.qza
How can we filter the feature table according to the above filtered sequences?