Greengenes2 and RESCRIPt
|
|
2
|
33
|
July 9, 2025
|
Greengenes2 vs. SILVA
|
|
0
|
47
|
July 3, 2025
|
train a sequence classifier on your own data
|
|
2
|
35
|
June 27, 2025
|
GG2 with V4-V5 primers 515FB-926R vs 2021 Silva
|
|
2
|
44
|
July 7, 2025
|
Why do we get higher species level assignment with an older GTDB classifier than with a more recent one?
|
|
8
|
115
|
March 27, 2025
|
Missing species sequence on Greengenes2 2024.09
|
|
2
|
40
|
March 18, 2025
|
Am I overthinking this? Dada2 and Greengenes2
|
|
6
|
89
|
April 18, 2025
|
Issue with Taxonomic Classification Greengene2 for 16S V4 region - Unassigned data
|
|
6
|
117
|
April 17, 2025
|
Greengenes 2022.10 phylogeny files
|
|
1
|
47
|
March 3, 2025
|
Greengenes2 2024.09
|
|
3
|
2469
|
March 3, 2025
|
Linking Greengenes2 to another feature table
|
|
6
|
77
|
February 14, 2025
|
Introducing Greengenes2 2022.10
|
|
83
|
27380
|
January 9, 2025
|
Trim sequences before using Greengenes2 database?
|
|
2
|
48
|
January 18, 2025
|
gg-13-8-99-515-806-nb-classifier.qza is not up-to-date
|
|
9
|
217
|
January 13, 2025
|
Chloroplast in Greegnenes 2 2022.10
|
|
4
|
54
|
January 10, 2025
|
Greengenes 2 with 515F-926R primers
|
|
2
|
58
|
January 3, 2025
|
Classifier confidence of 1 for all features
|
|
4
|
65
|
January 3, 2025
|
Arbitrary ASV fragment placement in Greengenes2
|
|
0
|
72
|
September 6, 2024
|
Unclassified at the phylum level
|
|
5
|
201
|
September 4, 2024
|
Best Discussion Forum for Greengenes 2?
|
|
7
|
160
|
August 28, 2024
|
Database With Best Accuracy at Genus Level for Human Microbiome?
|
|
8
|
212
|
August 28, 2024
|
Sequence and taxonomy file for GG2
|
|
8
|
179
|
June 15, 2024
|
Greengenes 2 confidence threshold
|
|
4
|
193
|
June 13, 2024
|
Weird letters and numbers after taxa ID - f__Bacillaceae_H_294103
|
|
7
|
207
|
June 29, 2024
|
taxa collapse and Greengenes2 taxonomy confusion
|
|
6
|
233
|
May 18, 2024
|
Handling polyphyletic taxa in Greengenes2
|
|
4
|
221
|
April 30, 2024
|
Where am I going wrong - filter features output empty (greengenes2)
|
|
23
|
455
|
April 14, 2024
|
Greengenes2 taxonomy chloroplast
|
|
2
|
194
|
April 12, 2024
|
Low percentage of matching unique query sequences in the process of greengenes2 non-v4-16s action
|
|
4
|
173
|
March 29, 2024
|
I want to use Greengenes2 for V3-V4 regions, I need to know where to start from and what process to follow
|
|
3
|
388
|
February 11, 2024
|