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Why do we get higher species level assignment with an older GTDB classifier than with a more recent one?
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8
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83
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March 27, 2025
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Missing species sequence on Greengenes2 2024.09
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2
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29
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March 18, 2025
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Am I overthinking this? Dada2 and Greengenes2
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6
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69
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April 18, 2025
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Issue with Taxonomic Classification Greengene2 for 16S V4 region - Unassigned data
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6
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73
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April 17, 2025
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Greengenes 2022.10 phylogeny files
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1
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33
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March 3, 2025
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Greengenes2 2024.09
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3
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1802
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March 3, 2025
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Linking Greengenes2 to another feature table
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6
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74
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February 14, 2025
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Introducing Greengenes2 2022.10
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83
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25984
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January 9, 2025
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Trim sequences before using Greengenes2 database?
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2
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47
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January 18, 2025
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gg-13-8-99-515-806-nb-classifier.qza is not up-to-date
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9
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156
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January 13, 2025
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Chloroplast in Greegnenes 2 2022.10
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4
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49
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January 10, 2025
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Greengenes 2 with 515F-926R primers
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2
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43
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January 3, 2025
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Classifier confidence of 1 for all features
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4
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61
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January 3, 2025
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Arbitrary ASV fragment placement in Greengenes2
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0
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56
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September 6, 2024
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Unclassified at the phylum level
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5
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175
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September 4, 2024
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Best Discussion Forum for Greengenes 2?
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7
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151
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August 28, 2024
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Database With Best Accuracy at Genus Level for Human Microbiome?
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8
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188
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August 28, 2024
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Sequence and taxonomy file for GG2
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8
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170
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June 15, 2024
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Greengenes 2 confidence threshold
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4
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184
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June 13, 2024
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Weird letters and numbers after taxa ID - f__Bacillaceae_H_294103
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7
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201
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June 29, 2024
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taxa collapse and Greengenes2 taxonomy confusion
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6
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225
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May 18, 2024
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Handling polyphyletic taxa in Greengenes2
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4
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218
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April 30, 2024
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Where am I going wrong - filter features output empty (greengenes2)
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23
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449
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April 14, 2024
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Greengenes2 taxonomy chloroplast
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2
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189
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April 12, 2024
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Low percentage of matching unique query sequences in the process of greengenes2 non-v4-16s action
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4
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170
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March 29, 2024
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I want to use Greengenes2 for V3-V4 regions, I need to know where to start from and what process to follow
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3
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384
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February 11, 2024
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Greengenes assigning wrong family to genus level
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9
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428
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February 26, 2024
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Issues with choosing classifiers on feature-classifier classify-sklearn
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4
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263
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February 19, 2024
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SEPP reference databases for Greengenes2
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4
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421
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February 17, 2024
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Taxonomy names confusion
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3
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270
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January 4, 2024
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