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denoising and quality filterin
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3
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19
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November 27, 2024
|
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Make OTU cluster from SILVAdatabase
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3
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43
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November 2, 2024
|
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concerns vsearch clustering speed
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5
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38
|
September 5, 2024
|
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fungal ITS analysis with QIIME2: current recommended workflow?
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7
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595
|
August 22, 2024
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Duplicates causing issues, how to handle merging and clustering?
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2
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52
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July 10, 2024
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How to import fasta files which have undergone vsearch based QC
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2
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66
|
July 5, 2024
|
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Vsearch dereplication plugin error
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6
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156
|
May 18, 2024
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qiime vsearch merge-pairs Missing option and Command not found
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7
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352
|
April 30, 2024
|
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Low percentage of matching unique query sequences in the process of greengenes2 non-v4-16s action
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4
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163
|
March 29, 2024
|
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qiime vsearch cluster-features-open-reference issue
|
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20
|
389
|
March 18, 2024
|
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Preparing mixed orientation reads for dada2
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6
|
626
|
February 27, 2024
|
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Clustering ASVs into OTUs
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5
|
226
|
February 5, 2024
|
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Frequency per feature is 1 - each read is being considered as unique feature
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10
|
324
|
December 9, 2023
|
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Looking for advice on poor merging results with vsearch
|
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10
|
413
|
November 19, 2023
|
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Galaxy - couldn't find vsearch join pairs
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4
|
212
|
September 6, 2023
|
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which ASVs are within an OTU?
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2
|
199
|
September 1, 2023
|
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Taxonomy consensus column
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4
|
622
|
May 21, 2023
|
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vsearch dereplicate problem
|
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5
|
393
|
May 18, 2023
|
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Merge feature tables before or after OTU generation from qiime dada2 output?
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2
|
265
|
March 30, 2023
|
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How to resolve missing OTUs in Qiime2 analysis despite finding through BLAST?
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5
|
526
|
April 28, 2023
|
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Good classification, poor clustering
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3
|
256
|
April 14, 2023
|
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How cluster ASV with different length in OTU ?
|
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8
|
863
|
March 9, 2023
|
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vsearch cluster-features-de-novo is taking too long
|
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6
|
628
|
January 14, 2023
|
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Didn't use vsearch but its citation is showing up in my provenance
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4
|
408
|
November 18, 2022
|
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vsearch classification error
|
|
19
|
702
|
September 23, 2022
|
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Guidance modifying q2-vsearch to recover UC file
|
|
5
|
753
|
August 17, 2022
|
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after vsearch join pairs ,,I lost many reads
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2
|
219
|
September 5, 2022
|
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Vsearch doesn't use more CPUs, why？And other similar codes have same problem.
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2
|
408
|
June 25, 2022
|
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vsearch join pairs
|
|
2
|
1141
|
May 15, 2022
|
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how can i get a reference-seqs in closeed-reference clusttering
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4
|
486
|
April 30, 2022
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