|
vsearch open-reference pipeline and phylogenetic tree
|
|
7
|
121
|
November 27, 2020
|
|
OTU picking with DADA2 input
|
|
4
|
99
|
September 25, 2020
|
|
About joining paired reads and quality control
|
|
5
|
139
|
September 12, 2020
|
|
TypeError while running vsearch join-pairs
|
|
4
|
83
|
September 11, 2020
|
|
Trimming and joining short reads resulted in few merged read on v4 region
|
|
7
|
223
|
September 4, 2020
|
|
Question about q2-ghost-tree
|
|
4
|
153
|
July 24, 2020
|
|
Clustering the ASVs into OTUs at 98% identity
|
|
4
|
253
|
July 23, 2020
|
|
plugin error from vsearch: list index out of range
|
|
3
|
105
|
July 16, 2020
|
|
Guidance modifying q2-vsearch to recover UC file
|
|
5
|
155
|
June 2, 2020
|
|
Error when using Vsearch dereplicate
|
|
13
|
245
|
May 15, 2020
|
|
qiime2 OTU picking with hundreds of samples
|
|
37
|
751
|
March 12, 2020
|
|
Steps for taxonomy assignment on dual-indexed sequence data generated by QIIME 1.9
|
|
5
|
181
|
March 22, 2020
|
|
hundreds of samples vsearch OTU
|
|
3
|
164
|
January 18, 2020
|
|
Question about vsearch dereplicate
|
|
5
|
510
|
February 9, 2020
|
|
vsearch index error
|
|
3
|
160
|
December 5, 2019
|
|
vsearch closed reference OTU picking error: No matches were identified to reference_sequences
|
|
5
|
290
|
November 17, 2019
|
|
using database indexing for vsearch
|
|
11
|
442
|
November 4, 2019
|
|
Vsearch plugin error for close reference classification
|
|
4
|
173
|
November 4, 2019
|
|
Dada2: Losing reads at merging step
|
|
3
|
180
|
October 28, 2019
|
|
How to retain 'Unmatched' features in barplots (as 'Unassigned') ?
|
|
7
|
456
|
November 23, 2019
|
|
Unmatched sequences percentage from vsearch
|
|
5
|
285
|
November 22, 2019
|
|
vsearch clustering and feature classifiers
|
|
4
|
165
|
October 28, 2019
|
|
plugin error from vsearch: No matches were identified to reference_sequences.
|
|
16
|
606
|
July 21, 2019
|
|
Yet another question regarding OTU clustering
|
|
11
|
444
|
March 29, 2019
|
|
Sir, there's no fly in my digital soup. what gives?
|
|
24
|
1217
|
January 4, 2019
|
|
Metaphlan2 vs vsearch for fungal metagenomic shotgun sequences
|
|
10
|
895
|
December 21, 2018
|
|
Qiime2 vsearch join PE reads question
|
|
3
|
258
|
December 8, 2018
|
|
Dealing with non-oriented amplicon libraries
|
|
6
|
684
|
December 3, 2018
|
|
Default parameters on vsearch join-pairs
|
|
5
|
1597
|
November 19, 2018
|
|
Vsearch dereplicate seqs - list index out of range
|
|
9
|
670
|
November 2, 2018
|
