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OTU picking with DADA2 input
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4
|
55
|
September 25, 2020
|
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About joining paired reads and quality control
|
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5
|
66
|
September 12, 2020
|
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TypeError while running vsearch join-pairs
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4
|
48
|
September 11, 2020
|
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Trimming and joining short reads resulted in few merged read on v4 region
|
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7
|
72
|
September 4, 2020
|
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Question about q2-ghost-tree
|
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4
|
108
|
July 24, 2020
|
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Clustering the ASVs into OTUs at 98% identity
|
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4
|
125
|
July 23, 2020
|
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plugin error from vsearch: list index out of range
|
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3
|
69
|
July 16, 2020
|
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Guidance modifying q2-vsearch to recover UC file
|
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5
|
113
|
June 2, 2020
|
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Error when using Vsearch dereplicate
|
|
13
|
149
|
May 15, 2020
|
|
qiime2 OTU picking with hundreds of samples
|
|
37
|
546
|
March 12, 2020
|
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Steps for taxonomy assignment on dual-indexed sequence data generated by QIIME 1.9
|
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5
|
132
|
March 22, 2020
|
|
hundreds of samples vsearch OTU
|
|
3
|
129
|
January 18, 2020
|
|
Question about vsearch dereplicate
|
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5
|
280
|
February 9, 2020
|
|
vsearch index error
|
|
3
|
117
|
December 5, 2019
|
|
vsearch closed reference OTU picking error: No matches were identified to reference_sequences
|
|
5
|
201
|
November 17, 2019
|
|
using database indexing for vsearch
|
|
11
|
327
|
November 4, 2019
|
|
Vsearch plugin error for close reference classification
|
|
4
|
136
|
November 4, 2019
|
|
Dada2: Losing reads at merging step
|
|
3
|
133
|
October 28, 2019
|
|
How to retain 'Unmatched' features in barplots (as 'Unassigned') ?
|
|
7
|
311
|
November 23, 2019
|
|
Unmatched sequences percentage from vsearch
|
|
5
|
209
|
November 22, 2019
|
|
vsearch clustering and feature classifiers
|
|
4
|
109
|
October 28, 2019
|
|
plugin error from vsearch: No matches were identified to reference_sequences.
|
|
16
|
497
|
July 21, 2019
|
|
Yet another question regarding OTU clustering
|
|
11
|
355
|
March 29, 2019
|
|
Sir, there's no fly in my digital soup. what gives?
|
|
24
|
1040
|
January 4, 2019
|
|
Metaphlan2 vs vsearch for fungal metagenomic shotgun sequences
|
|
10
|
764
|
December 21, 2018
|
|
Qiime2 vsearch join PE reads question
|
|
3
|
201
|
December 8, 2018
|
|
Dealing with non-oriented amplicon libraries
|
|
6
|
561
|
December 3, 2018
|
|
Default parameters on vsearch join-pairs
|
|
5
|
1346
|
November 19, 2018
|
|
Vsearch dereplicate seqs - list index out of range
|
|
9
|
524
|
November 2, 2018
|
|
When clustering ASVs from deblur with VSEARCH, is it possible to know the membership of resulting clusters?
|
|
8
|
557
|
October 26, 2018
|
