Using ANCOM-BC instead of aldex2 for differential abundance plots in R
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0
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29
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April 18, 2025
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Error when trying to install qiime2R package
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1
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19
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April 14, 2025
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MicrobiotaProcess: invalid zip name argument
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1
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27
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January 22, 2025
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Assistance with Genus-Level Classification and Filtering ASV/OTUs
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17
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226
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February 13, 2025
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qiime2R unable to access index for repository when downloading
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10
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210
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October 30, 2024
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Taxonomy Table Using R Studio
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1
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396
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February 15, 2024
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I want to get the mean and median abundance or relative abundance for each bacteria species from OTU tables
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8
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403
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January 14, 2024
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qiime2R error GreenGenes2 tree
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8
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342
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October 30, 2023
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Regarding Databases
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4
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464
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September 3, 2023
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read_q2metadata showing error
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3
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224
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August 27, 2023
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Failed in Reads merging
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6
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455
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August 6, 2023
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Error to executing the Tutorial: Integrating QIIME2 and R for data visualization and analysis using qiime2R
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4
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348
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July 2, 2023
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Trying to visualise q2-picrust2 data on R
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2
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3050
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March 30, 2023
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Qiime2R error while creating point and line plot
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3
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749
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April 21, 2023
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qiime2r installation in R
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2
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3045
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April 14, 2023
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Failure to plot Phylogenetic Tree
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3
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415
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March 10, 2023
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Building heatmap using Qiime2r
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4
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549
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January 24, 2023
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faith_pd_vector error in QIIME2r_V2 column
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3
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917
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January 17, 2023
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Data is demultiplexed or not? And DADA2 or Qiime2 as a pipeline?
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4
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907
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January 17, 2023
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Error in parse_taxonomy(taxonomy)
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0
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286
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December 1, 2022
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QIIME 1 Script Equivalent in QIIME 2 - summarize_taxa.py, alpha_diversity.py, beta_diversity.py
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2
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726
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December 17, 2022
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Heatmap of core microbiome using qiime2R
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1
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893
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October 5, 2022
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facing challenges specifying color and shape commands in https://forum.qiime2.org/t/tutorial-integrating-qiime2-and-r-for-data-visualization-and-analysis-using-qiime2r/4121#plotting-pcoa-12
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9
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381
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October 9, 2022
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Qiime2R Heatmap construction challenges
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1
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383
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October 1, 2022
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error installing qiime2R on R 4.2.0
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2
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1576
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August 1, 2022
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V4 sequence after extact-reads from 16S in not a substring
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3
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292
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July 2, 2022
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Taxonomy table looked different in R than when it was opened in QIIME (missing taxon level prefix)?
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3
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631
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June 1, 2022
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Order of sample in taxa barplots
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4
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574
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March 9, 2022
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Making alpha diversity Boxplots in R using .qza files from Qiime2 core-metrics-results
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6
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3675
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November 19, 2021
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Qiime2R: Rearranging x-axis in taxa_barplot
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2
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617
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May 21, 2021
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