Dear Qiime2 experts,
I have completed alpha and beta diversity analysis using qiime2 and now trying to import following files
faith_pd_vector.qza, shannon_vector.qza and observed_features_vector.qza from
core-metrics-results folder into R to make box plots as shown below.
When looking online I found a link where
phyloseq has been used to make some plots in R, however they haven't shown the original file that has been imported.
I'm not sure if it is even possible to import these files into R or do I need to import
feature table and do
alpha-diversity analysis in R to make such plots.
Can someone please help me import my files into R and make box-plots?