I faced a problem while my trial for getting the OTU table.
I think there is no problem in BIOM exporting, I successfully did using the following tutorial
However, when I tried running the following command
biom convert -i feature-table.biom -o feature-table.from_biom.txt --to-tsv
, I got this error
Error: Invalid value for “-i” / “–input-fp”: File “feature-table.biom” does not exist.
I wish you can help me.
Thanks for consideration