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Why is using rarefaction curves to help determine sampling depth prior to producing core diversity metrics not considered p-hacking/data-peeking?
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5
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227
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July 24, 2024
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How to choose my sampling depth according to aplpha rarefaction plot?
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15
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145
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July 29, 2024
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Rarefaction: diversity or richness?
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3
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416
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March 7, 2024
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rarefaction curve with number of samples on x axis
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4
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488
|
November 5, 2023
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Statistical analyses for beta-rarefaction output
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2
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202
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September 15, 2023
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how to compute alpha diversity and beta diversity without rarefaction
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5
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1214
|
June 10, 2023
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Are there difference rarefaction cut-off and rarefying in the micorbiome analysis ?
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9
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1236
|
April 26, 2023
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q2-repeat-rarefy: QIIME2 plugin for generating the average rarefied table for library size normalization using repeated rarefaction
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1
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1760
|
March 22, 2023
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If is normal that the exaggerated different between the numbers of ASV and OTU using the same sequencing data?
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1
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462
|
January 10, 2023
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Different Rarefaction Depths Between Sample Types
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1
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971
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November 23, 2022
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Get different number of sequences in denoising-stats and feature-table sums.
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0
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319
|
August 24, 2022
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Rarefy alpha beta metrics p sampling depth
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5
|
659
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July 9, 2022
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Rarefaction or not before calculate "niche breadth", "rare species" and "abundant species“
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5
|
860
|
May 26, 2022
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If the result of beta diversity in core-metrics-results was rarefacted?
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3
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293
|
June 25, 2022
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Rarefaction plot based on sample size
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2
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274
|
May 11, 2022
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Error with beta-rarefaction analysis
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12
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582
|
February 20, 2022
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q2-srs: QIIME2 plugin for library size normalization by scaling with ranked subsampling (SRS)
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3
|
1592
|
December 6, 2021
|
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Is it necessary to rarefy FeatureData[Sequence] if I rarefy FeatureTable[Freqeuncy]?
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2
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1119
|
November 15, 2021
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rarefy table with/without replacement default
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4
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1239
|
May 24, 2021
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Core features / normalization
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0
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448
|
April 1, 2021
|
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interpretation of rarefaction curve
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4
|
1322
|
May 7, 2021
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SRS: Alternative tool for library size normalisation
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16
|
3595
|
December 1, 2020
|
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rarefaction vs. relative abundance
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7
|
2743
|
October 12, 2020
|
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Rarefaction plot and rarefied table
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2
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1888
|
November 9, 2020
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Discarded samples from rarefaction reason/solution/occurence
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1
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560
|
October 7, 2020
|
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Is percentile-normalized data appropriate for UniFrac?
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5
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1167
|
August 13, 2020
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Why are my beta diversity results different from the tutorial?
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6
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605
|
August 9, 2020
|
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qiime diversity core-metrics-phylogenetic: singletons in rarefied table
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3
|
504
|
April 30, 2020
|
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Error in feature-table rarefy with imported table
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6
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1112
|
December 16, 2019
|
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Rarefaction of biom file
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1
|
739
|
December 12, 2019
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