Hello everyone,
I am a beginner using qiime2 and I got some question about demux and visualization.
I am perform the demux summaries the output for the samples (the result is shown in the photo below). It seems that the quality score should be maximum 40. However, my curve can only show a dotted line at score 30. All the detail between qs 30 and 40 cannot be shown. May I ask is there any way to solve this issue as I would like to use the detail for setting up the range in dada2. Thanks!
Hi @Ho_Ho_Chan, Can you describe the data that you're working with a little bit? What type of sequencing instrument was this generated on?