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DeepTaxa, a QIIME 2 plugin for 16S taxonomy
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1
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182
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July 2, 2026
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Help - DADA2 microbiome analysis
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3
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95
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May 4, 2026
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MIMt database for 16S, 18S, ITS, 23S and 28S new release available (March 26)
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0
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139
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March 18, 2026
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Significant 16S sequence loss while merging w/ DADA2, various truncation settings used
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2
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166
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November 5, 2025
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Analysis of 16S data from different regions using q2-fragment-insertion or other substitution
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2
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80
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July 10, 2025
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Is it necessary to separate ASVs classified at genus level into their respective sequences in ANCOMBC2 or other differential abundance analysis?
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2
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205
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July 8, 2025
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Reconciling 16s Databases in a Single Pipeline
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5
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302
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August 28, 2024
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Specificity and Sensitivity at Different Abundances?
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3
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80
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August 24, 2024
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Does QIIME2 support V1-V9 taxonomic classification?
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2
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477
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August 30, 2023
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Questions about 16S data from Novogene (UK)
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25
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2947
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August 9, 2023
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Is it best to work on abundance tables of ASVs or taxa?
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3
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1542
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May 23, 2022
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Losing a LOT of representative sequences after denoising
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5
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1028
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November 23, 2021
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Importing Multiplexed Paired End Sequence With Adaptors --> Demultiplexed Sequences
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3
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1329
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November 23, 2021
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Primer naming inconsistencies?
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2
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1090
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September 29, 2021
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Taxonomic assignment at the species level
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2
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1317
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August 13, 2021
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Questions about V3–V4 primers for 16S rRNA amplicon sequencing, and calculating overlap
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2
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22950
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July 21, 2021
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Methods for integrating 16S and RNAseq data
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2
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621
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April 1, 2021
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16S V3-V4 length : what to do with the sequences of shorter than expected length after DADA2?
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7
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6256
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November 7, 2020
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MiSeq output quality distribution.
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0
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950
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September 24, 2020
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Can we match 16s species to metagenomics species?
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0
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515
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January 21, 2020
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Normalization for microbiome 16s sequence analysis
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7
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5671
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June 27, 2019
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16s circular phylogenetic tree
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1
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794
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January 16, 2019
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How Do I Recover 18s Reads after Filtering in Qiime 2?
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2
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1554
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May 18, 2018
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16S copy number normalization?
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2
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3709
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January 16, 2018
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Downstream Analysis of 16S Illumina Sequence Files
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1
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1188
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January 5, 2018
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Extract reads - SILVA 128 issue
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1
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1474
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December 22, 2017
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Need/How/when to separate 16S and ITS on the same run (MiSeq)
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2
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1244
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October 9, 2017
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