|
Decontaminated OTU table won't rarefy with rooted tree
|
|
1
|
41
|
January 26, 2026
|
|
Uneven sample size, a need for rarefaction tool
|
|
7
|
222
|
February 11, 2025
|
|
Why is using rarefaction curves to help determine sampling depth prior to producing core diversity metrics not considered p-hacking/data-peeking?
|
|
3
|
336
|
July 24, 2024
|
|
How to choose my sampling depth according to aplpha rarefaction plot?
|
|
14
|
1179
|
June 28, 2024
|
|
Rarefaction: diversity or richness?
|
|
3
|
908
|
March 7, 2024
|
|
rarefaction curve with number of samples on x axis
|
|
3
|
626
|
October 5, 2023
|
|
Statistical analyses for beta-rarefaction output
|
|
1
|
230
|
August 15, 2023
|
|
how to compute alpha diversity and beta diversity without rarefaction
|
|
5
|
1812
|
June 10, 2023
|
|
Are there difference rarefaction cut-off and rarefying in the micorbiome analysis ?
|
|
9
|
1869
|
April 26, 2023
|
|
q2-repeat-rarefy: QIIME2 plugin for generating the average rarefied table for library size normalization using repeated rarefaction
|
|
1
|
1910
|
March 22, 2023
|
|
If is normal that the exaggerated different between the numbers of ASV and OTU using the same sequencing data?
|
|
1
|
539
|
January 10, 2023
|
|
Different Rarefaction Depths Between Sample Types
|
|
1
|
1151
|
November 23, 2022
|
|
Get different number of sequences in denoising-stats and feature-table sums.
|
|
0
|
336
|
August 24, 2022
|
|
Rarefy alpha beta metrics p sampling depth
|
|
4
|
743
|
June 8, 2022
|
|
Rarefaction or not before calculate "niche breadth", "rare species" and "abundant species“
|
|
3
|
1024
|
May 26, 2022
|
|
If the result of beta diversity in core-metrics-results was rarefacted?
|
|
2
|
323
|
May 25, 2022
|
|
Rarefaction plot based on sample size
|
|
1
|
292
|
April 10, 2022
|
|
Error with beta-rarefaction analysis
|
|
5
|
606
|
January 19, 2022
|
|
q2-srs: QIIME2 plugin for library size normalization by scaling with ranked subsampling (SRS)
|
|
3
|
1696
|
December 6, 2021
|
|
Is it necessary to rarefy FeatureData[Sequence] if I rarefy FeatureTable[Freqeuncy]?
|
|
1
|
1168
|
October 15, 2021
|
|
rarefy table with/without replacement default
|
|
3
|
1362
|
April 23, 2021
|
|
Core features / normalization
|
|
0
|
473
|
April 1, 2021
|
|
interpretation of rarefaction curve
|
|
3
|
1470
|
April 6, 2021
|
|
SRS: Alternative tool for library size normalisation
|
|
16
|
3977
|
December 1, 2020
|
|
rarefaction vs. relative abundance
|
|
7
|
3113
|
October 12, 2020
|
|
Rarefaction plot and rarefied table
|
|
1
|
2072
|
October 9, 2020
|
|
Discarded samples from rarefaction reason/solution/occurence
|
|
1
|
576
|
October 7, 2020
|
|
Is percentile-normalized data appropriate for UniFrac?
|
|
4
|
1257
|
July 13, 2020
|
|
Why are my beta diversity results different from the tutorial?
|
|
5
|
626
|
July 9, 2020
|
|
qiime diversity core-metrics-phylogenetic: singletons in rarefied table
|
|
2
|
544
|
March 30, 2020
|
