|
Unexpectedly high Shannon diversity values in QIIME 2
|
|
6
|
110
|
October 10, 2025
|
|
Shall I need to remove ASV with prevelance in one sample?
|
|
4
|
136
|
August 8, 2025
|
|
How to simplify the formula gini index in QIIME2? For example write in a R script.
|
|
2
|
71
|
November 1, 2024
|
|
Alpha diversity with filtered raw data or unfiltered raw data
|
|
1
|
130
|
April 24, 2025
|
|
Alpha diversity without rarefaction
|
|
2
|
153
|
April 10, 2025
|
|
Alpha diversity statistics including singletons
|
|
6
|
256
|
March 20, 2025
|
|
qiime diversity alpha-group-significance All numbers are identical in kruskal
|
|
3
|
56
|
December 6, 2024
|
|
scikit-bio.org has moved and links are broken
|
|
2
|
77
|
October 28, 2024
|
|
how can I do so that I can compare the diversity of different group
|
|
7
|
170
|
June 28, 2024
|
|
How to choose my sampling depth according to aplpha rarefaction plot?
|
|
14
|
1177
|
June 28, 2024
|
|
Plugin error from diversity [Errno 28] No space left on device
|
|
7
|
195
|
May 27, 2024
|
|
Core-metrics (Plugin error from diversity)
|
|
8
|
736
|
March 1, 2024
|
|
Alpha and Beta Diversity Explanations and Commands https://forum.qiime2.org/t/alpha-and-beta-diversity-explanations-and-commands/2282
|
|
4
|
506
|
December 7, 2023
|
|
microbiota analysis of insect species
|
|
18
|
848
|
November 28, 2023
|
|
Alpha Group Significance Error Message
|
|
4
|
244
|
November 15, 2023
|
|
ASV or OTU ? What do I have?
|
|
3
|
597
|
August 31, 2023
|
|
independent samples in alpha and beta diversity
|
|
2
|
424
|
August 31, 2023
|
|
Alpha and Beta Diversity Plots
|
|
2
|
1338
|
August 7, 2023
|
|
Plugin error from alpha diversity
|
|
5
|
539
|
July 20, 2023
|
|
Alpha and Beta Diversity Explanations and Commands
|
|
6
|
90604
|
September 15, 2018
|
|
Plugin error from diversity ：Metadata does not contain any columns that satisfy this visualizer's requirements
|
|
2
|
238
|
February 13, 2023
|
|
QIIME 1 Script Equivalent in QIIME 2 - summarize_taxa.py, alpha_diversity.py, beta_diversity.py
|
|
1
|
755
|
November 16, 2022
|
|
Plugin error from diversity to get alpha and beta diversity
|
|
2
|
952
|
July 21, 2022
|
|
Help in alpha diversity kruskal wallis test
|
|
2
|
663
|
May 25, 2022
|
|
Alpha diversity box plot
|
|
5
|
605
|
February 23, 2022
|
|
Collapsing feature table to a specific taxonomic rank before diversity analysis?
|
|
4
|
854
|
January 10, 2022
|
|
ACE metric for alpha diversity
|
|
1
|
1464
|
November 28, 2021
|
|
statistical tests for alpha diversity?
|
|
3
|
2470
|
November 11, 2021
|
|
Alpha diversity significance plot
|
|
2
|
449
|
September 8, 2021
|
|
Same q-values in alpha diversity test using Shannon diversity index.
|
|
1
|
857
|
July 23, 2021
|
