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Phylogenetic tree: Reconstruct vs. Prune - When to?
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6
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153
|
November 15, 2025
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Placing filtered ASV sequences into guide tree, per clade
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3
|
98
|
January 10, 2025
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Error occured while running for MAFFT in qiime2
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7
|
261
|
February 22, 2024
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ASVs of the same genus in different branches on the phylogenetic tree
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2
|
242
|
February 19, 2024
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What type of database to use for q2-fragment-insertion
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12
|
920
|
September 8, 2023
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Export phyloseq tree to qiime2
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2
|
552
|
July 8, 2023
|
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issues moving between greengenes classification and diversity metrics
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3
|
406
|
March 30, 2023
|
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Beta Diversity Profiling & Significance Testing
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11
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1012
|
November 1, 2022
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Remove reference tree from fragment insertion tree
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5
|
675
|
June 27, 2022
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Importing table and tree with spaces in IDs leads to mismatch
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2
|
494
|
August 25, 2021
|
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Need some help with phylogenetic diversity and other metrics
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1
|
744
|
April 19, 2021
|
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How to make a phylogenetic tree looking too complex more readable?
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8
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2559
|
December 4, 2019
|
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iqtree error for unrooted tree in phylogeny
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1
|
803
|
November 11, 2019
|
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QIIME2R -> trouble with phyloseq and rooted tree
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8
|
3544
|
October 28, 2019
|
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When to make the phylogenetic tree
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|
1
|
744
|
August 6, 2019
|
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Fix required: Tips in a tree detected as repeated
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4
|
770
|
June 25, 2019
|
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Alignment/Tree Building and Filtering samples
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2
|
839
|
March 13, 2019
|
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Filter representative FASTA sequences
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3
|
727
|
February 13, 2019
|
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Software to visualize the tooted-tree. qza file
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1
|
1188
|
August 15, 2018
|
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What to do about a single non-corresponding tree tip?
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3
|
776
|
August 3, 2018
|
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Collapsing phylogenetic tree
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1
|
1597
|
May 23, 2018
|
|
Error phylogen (fasttree)
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|
1
|
1291
|
May 21, 2018
|
|
After qiime phylogeny filter-table does one need qiime phylogeny "filter-sequence"?
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|
2
|
690
|
March 21, 2018
|
|
Loading Greengenes tree in iTOL
|
|
10
|
6874
|
February 13, 2018
|
|
File conversion
|
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2
|
2352
|
February 2, 2018
|
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From qiime2 to R : how to transform a .qza to .tre
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|
2
|
5644
|
January 22, 2018
|
|
Phylogenetic table with lablels
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|
1
|
1734
|
January 22, 2018
|
|
How to build a tree with tips collapsed based on the taxonomic classification
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|
2
|
3519
|
January 18, 2018
|
|
Tree visualization
|
|
20
|
15306
|
December 7, 2017
|
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How do I create a tree from a subset of samples?
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7
|
3873
|
December 22, 2017
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