|
Querying QIIME's plugins generally, and for making phylogenies specifically
|
|
2
|
566
|
June 15, 2021
|
|
Hierarchy output of gneiis ilr-phylogenetic
|
|
3
|
438
|
May 28, 2021
|
|
sepp in R (phyloseq)
|
|
3
|
501
|
May 2, 2021
|
|
Regarding online based SEPP phylogenetic tree construction
|
|
4
|
405
|
March 10, 2021
|
|
unable to stablish ssl connection
|
|
3
|
840
|
March 16, 2021
|
|
sampling depth value in phylogenetic tree
|
|
2
|
433
|
February 5, 2021
|
|
Plugin error from diversity The table does not appear to be completely represented by the phylogeny.
|
|
9
|
2682
|
January 3, 2021
|
|
Table Filtering with Phylogeny
|
|
2
|
533
|
January 2, 2021
|
|
vsearch open-reference pipeline and phylogenetic tree
|
|
6
|
1438
|
November 27, 2020
|
|
Empress - Barplots section of the main menu not showing up
|
|
3
|
571
|
October 20, 2020
|
|
missing id features as tip names in phylogeny
|
|
4
|
539
|
August 31, 2020
|
|
Pairwise Unifrac Analysis
|
|
9
|
1479
|
June 4, 2020
|
|
How to reflect the table information, which singleton and non-bacterial OTUs are removed, at representative_sequence file.
|
|
2
|
488
|
May 21, 2020
|
|
Converting file to .tre or .nexus?
|
|
3
|
4233
|
April 30, 2020
|
|
Insertion tree has dramatically reduced number of taxa
|
|
5
|
592
|
April 3, 2020
|
|
Blast for taxonomic assignment?
|
|
6
|
3578
|
December 6, 2019
|
|
Q2-phylogeny: Community Tutorial
|
|
0
|
14656
|
June 5, 2018
|
|
q2-phylogenize: a pipeline for associating microbial genes with environments, accounting for phylogeny
|
|
3
|
1130
|
June 2, 2019
|
|
QIIME 1 tree building versus Qiime2 tree building
|
|
12
|
907
|
July 2, 2019
|
|
Filter representative FASTA sequences
|
|
3
|
714
|
February 13, 2019
|
|
16s circular phylogenetic tree
|
|
1
|
760
|
January 16, 2019
|
|
Phylogenetic tree with taxonomic annotation
|
|
3
|
2632
|
October 21, 2018
|
|
150 vs. 300 bp paired-end data - benchmarking
|
|
2
|
3430
|
August 20, 2018
|
|
What value would I choose to pass for --p-sampling-depth?
|
|
3
|
2398
|
July 7, 2018
|
|
Error phylogen (fasttree)
|
|
2
|
1286
|
June 22, 2018
|
|
Is this phylogenetic tree normal
|
|
4
|
1853
|
April 13, 2018
|
|
File conversion
|
|
3
|
2343
|
March 5, 2018
|
|
Error with imported sepp tree in qiime2 diversity analyses
|
|
7
|
1877
|
December 31, 2017
|
|
"Bus error (core dumped)" while tree generation by fasttree
|
|
2
|
1460
|
December 15, 2017
|
|
Core matrix command Error: no such option: --i-phylogeny
|
|
2
|
1717
|
December 10, 2017
|
