Topics tagged phylogeny

Topic	Replies	Views	Activity
sampling depth value in phylogenetic tree General Discussion dada2 , import , demux , feature-classifier , feature-table , phylogeny , diversity	2	397	February 5, 2021
Plugin error from diversity The table does not appear to be completely represented by the phylogeny. Technical Support phylogeny	9	2482	January 3, 2021
Table Filtering with Phylogeny User Support feature-table , phylogeny	2	484	January 2, 2021
vsearch open-reference pipeline and phylogenetic tree User Support phylogeny , vsearch	6	1268	November 27, 2020
Empress - Barplots section of the main menu not showing up Community Plugin Support phylogeny	3	533	October 20, 2020
missing id features as tip names in phylogeny Technical Support phylogeny , alpha-rarefaction	4	500	August 31, 2020
Pairwise Unifrac Analysis Developer Discussion phylogeny , unifrac	9	1283	June 4, 2020
How to reflect the table information, which singleton and non-bacterial OTUs are removed, at representative_sequence file. User Support taxonomy , phylogeny	2	451	May 21, 2020
Converting file to .tre or .nexus? Other Bioinformatics Tools phylogeny	3	3455	April 30, 2020
Insertion tree has dramatically reduced number of taxa User Support qiita , phylogeny , silva	5	520	April 3, 2020
Blast for taxonomic assignment? General Discussion taxonomy , phylogeny	6	3009	December 6, 2019
Q2-phylogeny: Community Tutorial Tutorials tutorial , phylogeny , plugin-development	0	13921	June 5, 2018
q2-phylogenize: a pipeline for associating microbial genes with environments, accounting for phylogeny Community Contributions dada2 , deblur , taxonomy , phylogeny	3	1047	June 2, 2019
QIIME 1 tree building versus Qiime2 tree building User Support phylogeny	12	803	July 2, 2019
Filter representative FASTA sequences General Discussion phylogeny , tree	3	617	February 13, 2019
16s circular phylogenetic tree General Discussion phylogeny , 16s	1	676	January 16, 2019
Phylogenetic tree with taxonomic annotation User Support taxonomy , phylogeny	3	2462	October 21, 2018
150 vs. 300 bp paired-end data - benchmarking User Support taxonomy , phylogeny	2	2897	August 20, 2018
What value would I choose to pass for --p-sampling-depth? User Support phylogeny , core-metrics	3	2243	July 7, 2018
Error phylogen (fasttree) User Support taxonomy , phylogeny , tree	2	1170	June 22, 2018
Is this phylogenetic tree normal User Support taxonomy , phylogeny	4	1748	April 13, 2018
File conversion User Support phylogeny , tree , itol	3	2171	March 5, 2018
Error with imported sepp tree in qiime2 diversity analyses User Support phylogeny , core-metrics , tree , sepp , fragment-insertion	7	1738	December 31, 2017
"Bus error (core dumped)" while tree generation by fasttree User Support install , phylogeny	2	1344	December 15, 2017
Core matrix command Error: no such option: --i-phylogeny User Support phylogeny , core-metrics , diversity	2	1628	December 10, 2017
View.qiime2.org does not show phylogenetic trees because of size and lack of visual info? User Support phylogeny	3	891	November 21, 2017
Plugin error from diversity User Support phylogeny , core-metrics	6	5174	September 17, 2017