Thank you for your kind support. I have viewed the table.qzv at https://view.qiime2.org/visualization/ QIIME 2 artifact, and in particular the Interactive Sample Detail tab in that visualization. Now I am confused which value I will choose to pass for–p-sampling-depth? How many samples will I have to exclude from my analysis? I have three replicates for each treatment. I am attaching table.qzv file with this message. Kindly view and suggest me a valid sampling depth. Also guide me why we use this parameter?
The table.qzv is attached here
Thank you in Advance