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dada2 error: rcpp/SparseArray
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2
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43
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August 10, 2025
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PICRUST2 Input Data setting
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1
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74
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July 8, 2025
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Please help interpreting demux data
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2
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72
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July 18, 2025
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Minimum length of read in ASV (DADA2)
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6
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123
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July 9, 2025
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Shotgun sequencing and Trimming
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2
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39
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June 3, 2025
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Understanding min sequence length of F and R/ quality scores and how it is impacting dada2 downstream
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15
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146
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July 4, 2025
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Denoise pair returning DataFrame' object has no attribute 'map' error
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6
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85
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July 4, 2025
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dada2-paired giving return code 1
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7
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80
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June 28, 2025
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DADA2 fails silently on SLURM cluster (QIIME2 2024.10) — No .qza outputs, no error messages
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2
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46
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June 23, 2025
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Error with DADA2 with sequences of different runs.
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4
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66
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June 21, 2025
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Can trimming and dada 2
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3
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64
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May 19, 2025
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Low percentage of non-quimeric reads after dada2
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4
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75
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June 14, 2025
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Alpha diversity with filtered raw data or unfiltered raw data
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1
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89
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April 24, 2025
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Losing a lot of reads during merging
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4
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117
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May 19, 2025
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QIIME 2 Meta-Analysis of Rhizosphere Microbiome with Mixed V3-V4/V4 Data: Best Practices for Downstream Analysis
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14
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444
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May 18, 2025
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Questions about the running time of qiime dada2 denoise-ccs
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4
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131
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May 13, 2025
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trunc length setting in dada2
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2
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38
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May 12, 2025
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dada2 failed while running nextseq data
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13
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265
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May 12, 2025
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How can I perform learnErrors on a subset of reads?
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3
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59
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April 7, 2025
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alpha and beta diversity
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2
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76
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April 6, 2025
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low proportion of identified ITS - OTU features
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3
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82
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April 28, 2025
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Why do we get higher species level assignment with an older GTDB classifier than with a more recent one?
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8
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229
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March 27, 2025
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dada2 denoise-ccs most reads were filtered out
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10
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171
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April 26, 2025
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Expose more options for DADA2 mergePairs function
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1
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77
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March 18, 2025
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Am I overthinking this? Dada2 and Greengenes2
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6
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130
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April 18, 2025
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Unable to find all taxon as a result of taxanomic analysis
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3
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54
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April 13, 2025
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How to download seven-number-summaries TSV directly
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1
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39
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March 7, 2025
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DADA2 Denoise Single vs Paired Requirements
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4
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93
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April 7, 2025
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DADA2 : low non chimeric read counts after denoising step , --p-min-fold-parent-over-abundance
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12
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283
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April 7, 2025
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DADA2 Filtering Error - Failed to Write Record
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20
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94
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April 3, 2025
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