Topics tagged fastq

Topic	Replies	Views	Activity
Retrieving FASTQ files after PRONAME filtering for quality control Other Bioinformatics Tools fastq	3	80	September 3, 2026
QIIME2 microbiome analysis and python version General Discussion demux , fastq	2	109	March 29, 2025
Are barcode fastqfiles necessary for analysis? General Discussion barcode , fastq	4	88	October 15, 2024
Rename sample IDs within fastq.gz files Other Bioinformatics Tools fastq	4	785	June 29, 2024
What is the decent amount and quality of reads for 16s sequencing? General Discussion dada2 , fastq	3	442	February 19, 2024
Qiime2 import error: Errno2 Technical Support import , fastq	2	242	October 2, 2023
Importing data / using old and new FASTQ files to compare Technical Support paired-end , fastq	2	349	May 5, 2023
fastq.gz file is not in FastqGzFormat: file is uncompressed Technical Support fastq	2	1447	February 15, 2023
Importing .fastq files from a server into Galaxy running on the same server Technical Support import , fastq	0	471	May 26, 2022
importing FASTQ file issue Technical Support import , fastq	3	946	March 23, 2022
Importing fastq sequences that were previously transformed from ab1 files (Sanger Sequencing) User Support import , fastq-manifest , importing , fastq	2	1457	March 12, 2022
How to process sequence data sets with different length from different platforms? General Discussion dada2 , vsearch , fastq , cutadapt	0	335	September 14, 2021
Using Qiime2 to view the sequences in fastq files General Discussion fastq	2	2230	June 18, 2021
Simple import for fastq demultiplexed merged seqs Technical Support import , fastq , qiime2-r	2	426	March 17, 2021
Export merged paired-end fastq files User Support export , paired-end , fastq	2	961	January 14, 2021
Error when I try to import fastq files Technical Support import , manifest , fastq	2	731	January 13, 2021
can we convert paired-end-demux.qza to fastq files User Support fastq-manifest , paired-end , fastq	3	1324	November 26, 2020
Processing .fastq User Support fastq	10	1132	June 8, 2020
Creating fastq manifest formats from a single multiplexed fastq file User Support import , multiplexed , fastq	14	1591	April 29, 2020
Fastq.gz and quality score length do not match using type: EMPPairedEndSequences from MiSeq Technical Support import , fastq	7	2563	April 13, 2020
I am still struggling with importing FASTQ into qiime 2 User Support fastq	0	697	October 22, 2019
Importing a single fastq file into QIIME2 User Support import , qiime1 , fastq	15	2898	August 22, 2019
Metaphlan2 vs vsearch for fungal metagenomic shotgun sequences User Support vsearch , fungi , fastq	8	2500	November 20, 2018
Closed-reference otu picking from fastq file? User Support import , taxonomy , otus , vsearch , fastq	1	742	August 13, 2018
From QIIME fna to QIIME2 diversity and taxonomy data User Support import , fasta , fastq	6	1819	June 1, 2018
Plugin error from demux User Support import , demux , fastq	3	2568	February 26, 2018
Producing the Reverse-complement of each sequence in fastq files User Support fastq , reverse-complement	1	1274	February 19, 2018
Importing fastq.gz files (Cassava 1.8) User Support import , paired-end , fastq	17	9190	December 20, 2017
Quality filter paired end fastq's User Support quality-filter , paired-end , fastq	5	3603	December 22, 2017
Problem importing fastq.gz files User Support import , fastq	4	2448	November 3, 2017