Topics tagged feature-classifier

Topic	Replies	Views	Activity
Set a seed for reproducibility of the qiime feature-classifier classify-sklearn Technical Support feature-classifier , queued	3	48	April 25, 2024
Trouble with self-trained 18S Classifier - not assigning lower taxa levels User Support feature-classifier , queued	0	39	April 24, 2024
Combining taxonomy from different classifiers to eliminate unidentified sequences? [newbie question] General Discussion feature-classifier , taxonomy , classifier	1	42	April 23, 2024
Taxonomy Classifier Error User Support feature-classifier	2	51	April 19, 2024
many unassigned fungal sequences User Support dada2 , feature-classifier	6	144	April 16, 2024
q2-feature-classifier for PR2 dataset Technical Support feature-classifier , taxonomy	2	53	April 16, 2024
Error running feature-classifier classify-consensus-vsearch Technical Support docker , feature-classifier	7	55	April 15, 2024
Killed qiime feature-classifier fit-classifier-naive-bayes Technical Support feature-classifier	3	53	April 15, 2024
Available: Pre-trained classifier of V3-V4 (341F, 805R) region with gg_99 Community Contributions feature-classifier	10	8372	April 13, 2024
New taxonomy names in old classifier General Discussion feature-classifier , taxonomy	2	63	April 12, 2024
How do Qiime2 naive Bayes classifiers handle query sequences shorter than reference sequences used for training? User Support feature-classifier	2	48	April 11, 2024
Difference in classification with complete sample set and a subsample User Support feature-classifier	15	190	March 27, 2024
Plugin error from feature-classifier：A worker process managed by the executor was unexpectedly terminated User Support dada2 , feature-classifier	5	91	April 24, 2024
An error occurs during the feature classification User Support feature-classifier	4	83	April 22, 2024
Plugin error from feature-classifier - Threads Technical Support feature-classifier	4	106	March 25, 2024
pre-trained UNITE 10.0 classifiers for QIIME 2024.2 (and older!) Data resources feature-classifier , taxonomy , fungi , unite	9	4330	March 15, 2024
(1/1) Missing option '--m-metadata-file'. in qiime feature-classifier classify-samples Technical Support feature-classifier	5	76	April 14, 2024
Naive-Bayes classifiers: q2_rescript vs q2_feature-classifier Technical Support feature-classifier , rescript	2	105	March 25, 2024
Taxonomic Data: Using 18S-Nemabase in Qiime2 instead of Silva? General Discussion feature-classifier , taxonomy	17	383	February 16, 2024
Issue using Silva classifier high number of only Bacteria assigned User Support feature-classifier , taxonomy	3	171	March 17, 2024
I want to use Greengenes2 for V3-V4 regions, I need to know where to start from and what process to follow Community Plugin Support feature-classifier , v3v4 , ribosomal-database , greengenes2	3	228	February 11, 2024
NifH database for taxonomic assignment in qiime2 General Discussion dada2 , feature-classifier , taxonomy	7	259	February 9, 2024
q2-classifier does not work with WSL Technical Support feature-classifier	2	86	March 10, 2024
Taxonomic classification at subspecies level General Discussion dada2 , feature-classifier , rescript	1	95	February 5, 2024
Invalid Filepath: Qiime feauture classifier and pre-formated rescript seq file User Support feature-classifier , rescript	4	92	March 5, 2024
Training classifier using RESCRIPt and enlarging database with 'extract-seq-segments' for single-end sequences User Support feature-classifier	4	228	March 3, 2024
How can I set the parameters of feature-classifier extract-reads ? General Discussion dada2 , feature-classifier , silva	1	113	January 30, 2024
Invalid value for '--i-reads': Expected an artifact of at least type FeatureData[Sequence]. User Support import , feature-classifier	6	150	March 1, 2024
How to train a UNITE classifier using RESCRIPt Tutorials feature-classifier , taxonomy , tutorial , its , unite , rescript	4	608	January 19, 2024
Alpha diversity Simpson Index Technical Support feature-classifier , taxonomy	2	111	February 19, 2024