Silva

Topic	Replies	Views	Activity
how to compare SILVA 138 taxonomy and NCBI taxonomy taxonomy , silva , ncbi	3	447	August 22, 2023
extracting amplicon region from alignment feature-classifier , taxonomy , silva	2	481	August 2, 2023
Update of Greengenes feature-classifier , silva , greengenes2	1	819	July 10, 2023
classify-sklearn not working without error message feature-classifier , silva	2	346	July 6, 2023
Understanding options for assigning taxonomy feature-classifier , taxonomy , silva	2	799	May 16, 2023
Taxonomy assignment using Silva 138 feature-classifier , taxonomy , silva	17	10320	April 5, 2023
What does mean 'plant-corpus'? silva , clawback , readytowear	2	605	March 9, 2023
Could "chloroplast" sequences actually be mitochondrial? silva	1	517	March 8, 2023
problem with feature-classifier classify-consensus-vsearch feature-classifier , taxonomy , silva	6	958	February 14, 2023
How to interpret SILVA taxonomic classifications taxonomy , silva	2	666	February 9, 2023
Downloading SILVA database silva	2	4740	January 30, 2023
Redoing analysis from QIIME 1, Archaea has mostly disappeared taxonomy , silva	4	620	October 23, 2022
Differences of unassigned, unidentified, uncultured taxa. taxonomy , silva	1	1331	June 9, 2022
silva138 16S database contains eukaryota after filtering filtering , silva	2	1822	April 29, 2022
SILVA 138 assigning incorrect species taxonomy , silva	2	1602	January 5, 2022
Can I use different versions of Silva for taxonomic classification and fragment insertion feature-classifier , taxonomy , silva , fragment-insertion	4	773	December 8, 2021
Importing Multiplexed Paired End Sequence With Adaptors --> Demultiplexed Sequences filtering , metadata , import , demux , feature-classifier , multiplexed , silva , 16s , cutadapt	3	1329	November 23, 2021
Questions about the SILVA 132 QIIME-compatible database, and using it for taxonomic classification of 16S rRNA amplicons feature-classifier , taxonomy , silva	2	2834	August 27, 2021
Silva 132 Database, which taxonomy & reference sequence files to select for classifier training? import , feature-classifier , taxonomy , silva	6	1994	February 19, 2021
ERROR in Downstream analyses (taxonomic) for "Microbiome analyst" feature-classifier , taxonomy , silva	1	1014	February 16, 2021
RESCRIPt, SEPP and database correlation silva , sepp , rescript	8	1797	February 3, 2021
Invalid character in sequence: b'U' feature-classifier , silva	1	1109	January 14, 2021
separate archaea-only database from Silva database import , silva	3	1331	January 8, 2021
Silva 138.1, which database do I download? Ref NR 99 or Ref? feature-classifier , silva	3	9053	January 7, 2021
How do I choose the database for the archaea amplicons anotation. silva	6	1432	December 23, 2020
q2-fragment-insertion with silva v138 silva , fragment-insertion	2	2014	December 7, 2020
Aligned sequences and Rescript silva , rescript	6	1162	October 14, 2020
Resources for using classify-consensus-blast on 16S data feature-classifier , taxonomy , greengenes , silva	3	1584	July 7, 2020
Silva 138 for Qiime2 silva	8	8458	June 25, 2020
Taxonomic classification 'Taxon' field discrepancies feature-classifier , taxonomy , ancom , silva	3	1006	June 16, 2020