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multiple sequences assigned to same organism, copy number issue or best guess?
|
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5
|
254
|
July 23, 2024
|
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Taxonomic Data: Using 18S-Nemabase in Qiime2 instead of Silva?
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18
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1092
|
July 23, 2024
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fungal ITS analysis with QIIME2: current recommended workflow?
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6
|
2293
|
July 22, 2024
|
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How to Sort Out Differences Between 16S rRNA Gene Sequence Databases
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1
|
157
|
July 21, 2024
|
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About PICRUST2 database for training rep-seq
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2
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115
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July 19, 2024
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Automatically predicting trimming parameters.
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9
|
364
|
July 13, 2024
|
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Standard vs compositional approach for abundance
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3
|
201
|
July 12, 2024
|
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Duplicates causing issues, how to handle merging and clustering?
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2
|
119
|
July 10, 2024
|
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combine technical replicates 2 out of 3
|
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1
|
82
|
July 9, 2024
|
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de-novo variant calling at 0.5% on Nanopore data
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3
|
113
|
July 7, 2024
|
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ANCOM-BC2 and continuous variables
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2
|
257
|
July 2, 2024
|
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alpha correlation and adjusted p-value
|
|
7
|
296
|
July 2, 2024
|
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When processing Pacbio full-length 16S data, the number of sequences generated in the OTU table or ASV table is too small
|
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1
|
191
|
July 1, 2024
|
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Potential artifacts produced with DADA2 wrapped in qiime2-2018.8 - need advice
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6
|
1179
|
January 7, 2019
|
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how can I do so that I can compare the diversity of different group
|
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7
|
172
|
June 28, 2024
|
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Is it possible to progress further if you don't know the primers of the dataset?
|
|
1
|
82
|
June 20, 2024
|
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Sequence and taxonomy file for GG2
|
|
8
|
248
|
June 15, 2024
|
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Combining 16S amplicon data from various regions.
|
|
6
|
501
|
June 14, 2024
|
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Greengenes 2 confidence threshold
|
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4
|
240
|
June 13, 2024
|
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PERMANOVA multivariate model with covariates that do not exhibit homogeneity in dispersion?
|
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1
|
255
|
June 13, 2024
|
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Seeking Advice on Primer and Adapter Trimming for MiSeq Amplicon Sequencing Data Using Cutadapt
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0
|
187
|
June 4, 2024
|
|
Merging species derived from spiked species
|
|
0
|
121
|
June 3, 2024
|
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Microbiome Taxa Analysis for two factor interaction
|
|
2
|
145
|
June 12, 2024
|
|
Changing the beta-group-significance q-value correction?
|
|
2
|
79
|
June 8, 2024
|
|
All sequences either 159 or 151 bp, normal? Illumina Novaseq6000
|
|
1
|
217
|
June 7, 2024
|
|
Normalizing Presence/Absence Data
|
|
3
|
284
|
June 5, 2024
|
|
Removal of Illumina Adapters
|
|
1
|
205
|
May 30, 2024
|
|
Low percentage of merged sequences
|
|
3
|
154
|
May 27, 2024
|
|
DADA2 error model with small dataset
|
|
1
|
140
|
May 23, 2024
|
|
Is it a bad idea to use DADA2 for non-metagenomic amplicon sequencing NGS data?
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|
3
|
274
|
May 20, 2024
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