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Rarefaction vs Rarefying and when to use them in your analysis pipeline
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16
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1186
|
October 16, 2025
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Parallel config on HPC
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9
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297
|
May 10, 2025
|
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Trouble installing QIIME 2 2026.1
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18
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590
|
March 25, 2026
|
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Unexpected lack of associations with ancombc2
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11
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348
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July 30, 2025
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Unable to install QIIME 2 2026.1 using WSL
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24
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373
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March 13, 2026
|
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Help/advice on truncation parameters
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14
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274
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August 25, 2025
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q2-boots and new QIIME 2 Library installation questions
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12
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275
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June 9, 2025
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Is there a pre-trained QIIME 2 classifier with full-length 16S (.qza)?
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10
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224
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August 14, 2025
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MOSHPIT: removing contaminant reads from metagenome data
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12
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412
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November 6, 2025
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How to perform SILVA V3 classifier training?
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11
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212
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January 4, 2026
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Almost all Reads are unclassified - custom 18S V4 classifier
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13
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231
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May 26, 2025
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The flufl.lock problem is encountered during parallel multitasking
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17
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140
|
August 28, 2025
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installation errors in diamond database and eggnog database
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17
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420
|
December 7, 2025
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Abbreviating taxonomic names in R
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11
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237
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November 12, 2025
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How to convert FASTQ files to QZA files ?
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16
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271
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June 16, 2025
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Help With Error When Installing Qiime
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33
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270
|
May 18, 2025
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Handling DADA2 and Feature table results
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9
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130
|
August 14, 2025
|
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guidance using quality-control evaluate-taxonomy and evaluate-composition
|
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9
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135
|
January 19, 2026
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Problem with capillery FASTA data handling
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20
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293
|
October 3, 2025
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Q2 2024.5-present Silva classifier update
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11
|
98
|
March 7, 2026
|
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How to install QIIME2 through docker? Did you met this issue?
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15
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179
|
September 1, 2025
|
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Effect of primer removal on chimera detection in DADA2
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11
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204
|
September 26, 2025
|
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Why won't this qzv load in view.qiime2.org by URL
|
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12
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135
|
October 30, 2025
|
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training classifier SILVA: what is the best way?
|
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12
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273
|
November 1, 2025
|
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(1/1?) No such option: --m-metadata-column
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14
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197
|
May 30, 2025
|
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Vega Editor not working on Chrome or Safari
|
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14
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210
|
December 5, 2025
|
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Ancom-BC2 error: No features remained in your taxonomy
|
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11
|
210
|
June 28, 2025
|
|
QIIME Docker Trouble with Running Container
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16
|
107
|
January 17, 2026
|
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core metrics results paradox
|
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10
|
81
|
January 5, 2026
|
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bivalve gut microbiota, water and soil samples What OTU cluster?
|
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11
|
89
|
January 19, 2026
|
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QIIME2-Compatible Database for AMF Taxonomy Assignment – Issues with SILVA Lineage Depth
|
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10
|
203
|
July 7, 2025
|
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importing MAGs into moshpit
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11
|
209
|
July 13, 2025
|
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Understanding min sequence length of F and R/ quality scores and how it is impacting dada2 downstream
|
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15
|
167
|
July 4, 2025
|
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q2-fondue: sra-tools configuration
|
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9
|
175
|
August 2, 2025
|
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How to perform filtering step for forward read only analysis?
|
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14
|
154
|
January 31, 2026
|
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q2-FMT install on 2025.4
|
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15
|
170
|
December 8, 2025
|
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Making insect classifier
|
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11
|
133
|
June 19, 2025
|
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Qiime2 view issue with demux visualizations
|
|
13
|
57
|
December 21, 2025
|
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Downloading Qiime2 2024.10 on Hoffman2
|
|
11
|
140
|
December 14, 2025
|
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q2-boots, q2-gemelli, rarefaction, and sampling depths
|
|
9
|
82
|
March 25, 2026
|
|
PaBio 16s full length results
|
|
13
|
148
|
January 15, 2026
|
|
Qiime 2 issue ! Semantic type SampleData[Sequences] is invalid
|
|
13
|
111
|
May 25, 2025
|
|
Qiime2 NCBI adapters / primers filter
|
|
9
|
124
|
August 31, 2025
|
|
Question about consensus taxonomy assignment in classify-consensus-vsearch
|
|
9
|
185
|
September 23, 2025
|
|
How to install silva and busco through quast?
|
|
10
|
106
|
August 24, 2025
|
|
Feature-table gives: 'ascii' codec can't decode byte 0xc3 in position 4 Error
|
|
11
|
122
|
January 23, 2026
|
|
Difficulty with Greengenes2 2022.10
|
|
12
|
122
|
March 1, 2026
|
|
Metadata file path doesn't exist when generating core diversity metrics
|
|
13
|
112
|
January 11, 2026
|
|
Error when using qiime taxa barplot after fragment-insertion
|
|
9
|
105
|
September 13, 2025
|
|
Annotation and Classifier question
|
|
17
|
86
|
March 18, 2026
|
