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Choosing Optimal Sampling Depth for Core Diversity and Alpha Rarefaction Analysis
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3
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63
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February 28, 2025
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Doubts in the analysis - Differential abundance analysis
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2
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43
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February 28, 2025
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Creating a visuaization fasta file from a .qza file
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2
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44
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February 28, 2025
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Install the new version Qiime2 in Linux
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2
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25
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February 27, 2025
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Which position is best for trimming in a paired-end approach?
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11
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73
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February 25, 2025
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ANCOM-BC barplot interpretation
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4
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63
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February 23, 2025
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Plugin Error in `qiime diversity core-metrics-phylogenetic` Command (Exit Status 126)**
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5
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34
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February 21, 2025
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How are taxa sorted in the taxa bar plot?
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2
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16
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February 20, 2025
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High chimera percentage on certain samples
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7
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56
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February 19, 2025
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The feature-classifier step is too time consuming
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3
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25
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February 19, 2025
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Filtering eukaryotes from SILVA database
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4
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38
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February 17, 2025
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Denoising stat results
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3
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49
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February 17, 2025
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Linking Greengenes2 to another feature table
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6
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74
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February 14, 2025
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Questions about denoising-CCS with Dada2
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5
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87
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February 14, 2025
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How to interpret significance from beta group diversity boxplots?
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13
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97
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February 15, 2025
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RESCRIPT: species information in GTDB
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5
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53
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February 15, 2025
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Taxonomy classification
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3
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49
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February 8, 2025
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How to interprete box plots beta diversity plot ?
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7
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41
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February 8, 2025
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ANCOM-BC visualization issue
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5
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62
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February 7, 2025
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Is there an issue with the 2024.5 silva138-99-nb classifier?
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5
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119
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February 7, 2025
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metabarcoding sequences from Novogene which to use?
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2
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42
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February 7, 2025
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How long it takes for learning error rates step of DADA2?
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15
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94
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February 6, 2025
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Assistance with Genus-Level Classification and Filtering ASV/OTUs
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17
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225
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February 13, 2025
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Discrepancies in Shannon Index Calculations Between QIIME2 and vegan R Package
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4
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62
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February 3, 2025
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Heatmap plugin error
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2
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20
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February 3, 2025
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bracken not accepting SampleData[Kraken2Report % Properties('contigs')]
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3
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38
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February 1, 2025
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Taxonomic asignation using non-16 region (nosZ)
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2
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21
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January 27, 2025
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Would qiime 2 support Mycobacterium data analysis ?
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4
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38
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January 20, 2025
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qiime info FileNotFoundError on 2024.10 amplicon Docker
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17
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151
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January 23, 2025
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Taxonomic discrepancy with Greengenes, Silva and NCBI
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5
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106
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January 23, 2025
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