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lexicographical sorting in `qiime feature-table tabulate-seqs`
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4
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106
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December 13, 2025
|
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quality control with greengenes2
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2
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41
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December 11, 2025
|
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diversity alpha-correlation for groups
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2
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59
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December 9, 2025
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Significant 16S sequence loss while merging w/ DADA2, various truncation settings used
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3
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123
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December 6, 2025
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confidence filtering pre or post classifier?
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4
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89
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December 1, 2025
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Heatmap HTML file downloaded instead of SVG file ?
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7
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86
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December 1, 2025
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Merge duplicate samples in a table
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2
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61
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November 24, 2025
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New Illumina i100 system data output question.
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2
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211
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November 24, 2025
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High read loss after Deblur denoise-other despite permissive parameters and mostly uniform-length reads
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2
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57
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November 21, 2025
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Train PR2 Classifier
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4
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237
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November 20, 2025
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Observed ASV richness drops after adding 3rd MiSeq library — why do I lose ~100 species when I merge libraries?
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4
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42
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November 16, 2025
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ITS denoising truncation
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2
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64
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November 15, 2025
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Low % of reads pass merging and chimera filter after DADA2 for rSSU (Fungi)
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2
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116
|
November 15, 2025
|
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Interpretation of low "percentage of input non-chimeric" in DADA2 denoising stats
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2
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164
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November 15, 2025
|
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First-differences mis-handling of unequal time
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2
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64
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November 14, 2025
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Chimeras - dada2 settings, and optimal PCR polymerase?
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2
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40
|
November 13, 2025
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ANCOM-BC analyis: comparing 3+ groups
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6
|
162
|
November 13, 2025
|
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Need help choosing truncation lengths for DADA2 and interpreting the demultiplexed sequence count summary.
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2
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52
|
November 13, 2025
|
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training classifier SILVA: what is the best way?
|
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12
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340
|
November 1, 2025
|
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quality-filter q-score Mínimum Threshold
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2
|
52
|
November 1, 2025
|
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How to obtain the 99% similarity clustering sequence of Greengenes2？
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2
|
70
|
October 21, 2025
|
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An error occurred when using Greengenes2
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6
|
79
|
October 20, 2025
|
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Importing Taxonomy into Qiime2
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8
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166
|
October 19, 2025
|
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ABI reads with Ns: OTUs & classification
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4
|
100
|
October 14, 2025
|
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heatmap generation : clustered groups
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2
|
54
|
October 13, 2025
|
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How to filter or reassign taxonomic names in QIIME 2?
|
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5
|
85
|
October 12, 2025
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Is ~25% final non-chimera read retention acceptable, and what is the expected range?
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2
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93
|
October 12, 2025
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How to build an OTU table using ONT sequencing
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6
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193
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October 4, 2025
|
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P value adonis test + ancombc
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4
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74
|
September 27, 2025
|
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16S CCS without primers: how to skip --p-front/--p-adapter in denoise-ccs?
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4
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111
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September 26, 2025
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