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What are the criteria for choosing the optimal "--p-min-fold-parent-over-abundance" parameter in dada2?
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1
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59
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July 9, 2021
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Viewing taxonomy file
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1
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57
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July 9, 2021
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Request for help with Barcode or Metafile
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1
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45
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July 5, 2021
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ISME-Latinamerica 2021 Discussion Thread
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16
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430
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July 3, 2021
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Differences in species composition between QIIME1 and QIIME2 at the phylum level
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23
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135
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July 3, 2021
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Elevated Unassigned sequences with ITS data
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4
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91
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July 3, 2021
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Interpretation on alpha-rarefaction
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3
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53
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July 2, 2021
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Full Length 16s Nanopore data analysis with Qiime2?
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1
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42
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July 2, 2021
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Dada2 vs Qiime2 plugin Dada2 on Quality score
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8
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102
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July 2, 2021
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Show the top abundant ASV composition with interactive bar plots?
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5
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72
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July 2, 2021
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exported unweighted UNIFRAC distance matrix text file is filled with 0s at end
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3
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53
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July 1, 2021
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scikit-learn version error?
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1
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43
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July 1, 2021
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Feature classifier with multiple primers
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3
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47
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July 1, 2021
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ANCOM parameters and interpreting output
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6
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81
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June 30, 2021
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metadata type column from numeric to categorical
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2
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72
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June 29, 2021
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Inquiry about Demultiplexed sequence counts summary
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10
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76
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June 29, 2021
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error: Feature IDs found in the table are missing from the taxonomy, after merging 2 runs
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3
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57
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June 28, 2021
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Cannot figure out, how to generate Qual file for FASTA sequences imported into Qiime2
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2
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47
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June 28, 2021
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Only 0.5% of reads passing the filter step in denoise.. but the data is good quality! (right?)
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6
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103
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June 28, 2021
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Importing OTUs in fasta format with associated frequency table
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1
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44
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June 27, 2021
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dada2 denoise-paired R
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17
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197
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June 25, 2021
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Improving taxonomic classification
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7
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165
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June 25, 2021
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qiime demux summarize report an error
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1
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28
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June 24, 2021
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A mapping file is different from a metadata file, is that true?
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2
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69
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June 24, 2021
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q2- longitudinal feature volatility analysis
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9
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74
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June 23, 2021
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Is it allowed to display QIIME visualization files on own web page?
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1
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51
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June 23, 2021
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import a feature table in .tsv
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3
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48
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June 23, 2021
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Orienting Reads with classifier-consensus-vsearch
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1
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47
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June 23, 2021
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what proportion of reads is discarded in the deblur step is normal?
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5
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51
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July 23, 2021
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Zooming (out) with Emperor
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4
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36
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July 23, 2021
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