Topics tagged feature-classifier

Topic	Replies	Views	Activity
UNITE, Include certain species of fungi User Support feature-classifier , taxonomy , unite , rescript	2	100	February 5, 2024
UNITE taxonomic annotation User Support feature-classifier , taxonomy	2	156	February 4, 2024
creating a classifier for lepidopterans General Discussion feature-classifier	1	114	January 3, 2024
How can I determine whether the classifier I trained functions well? User Support feature-classifier	2	153	January 21, 2024
How to generate confidence value from consensus-blast? User Support feature-classifier	3	96	January 21, 2024
"[Errno 28] No space left on device" during Silva-based taxonomy classification Technical Support feature-classifier , silva	17	213	January 16, 2024
aligned-rep-seqs.qza User Support feature-classifier	7	177	January 13, 2024
Multiple feature-classifier commands run and then killed User Support feature-classifier , greengenes2	10	198	January 11, 2024
Many questions about clustering in the qiime vsearch plugin User Support feature-classifier , taxonomy , otus , sample-classifier	10	357	January 11, 2024
BLAST parameters Developer Discussion feature-classifier	6	191	December 8, 2023
train a greengenes 2022 classifier for forward reads only Technical Support feature-classifier , greengenes	5	206	January 7, 2024
Questions about SILVA classifier for v3v4 User Support feature-classifier , silva , rescript	2	185	January 1, 2024
How to customise a properly formatted feature classifier? User Support feature-classifier , pre-trained	3	116	January 1, 2024
ITS fungal feature-classifier classify-sklearn error User Support feature-classifier , taxonomy	18	453	January 1, 2024
qiime feature-classifier classify-consensus-blast with --p-num-threads 10 not working Technical Support feature-classifier	7	172	December 31, 2023
error in creating Silva database using RESCRIPt User Support feature-classifier	3	691	December 31, 2023
Is my command right for classifying ? (I changed my classifier command to use q2-feature-classifier) General Discussion r , feature-classifier , taxonomy , feature-table	4	265	November 22, 2023
Training classifier for taxonomic analysis General Discussion feature-classifier , taxonomy	2	378	November 20, 2023
taxonomic classification User Support feature-classifier , taxonomy	4	351	December 21, 2023
Support with greengenes taxonomy. Output with [ ] User Support feature-classifier , taxonomy	4	184	December 17, 2023
Using RESCRIPt's 'extract-seq-segments' to extract reference sequences without PCR primer pairs. Tutorials feature-classifier , taxonomy , tutorial , its , rescript , trnl , co1 , ssu , lsu	7	3938	November 14, 2023
classify-sklearn automatically assigns Kingdom even if sequence is unassigned User Support feature-classifier , taxonomy	2	155	December 14, 2023
Using Greengenes2 for Naive Bayes V3V4 classifier Technical Support feature-classifier , taxonomy , greengenes2	4	365	December 14, 2023
qiime 2 shogun taxonomy classification Community Plugin Support feature-classifier , taxonomy	3	135	November 8, 2023
Frequency per feature is 1 - each read is being considered as unique feature Technical Support feature-classifier , feature-table , vsearch	10	209	December 9, 2023
Issue with feature-classifier (single sample vs multiple samples) User Support feature-classifier , taxonomy	6	232	December 7, 2023
V3-V4 region, training a classifier, parameters User Support feature-classifier , taxonomy , pre-trained	2	319	December 1, 2023
Greengenes2 database methods, which one to use? User Support feature-classifier , taxonomy , feature-table , greengenes2	9	539	November 26, 2023
differences between qiime classifier and NCBI blast report for moving pictures tutorial User Support feature-classifier , taxonomy	4	296	November 26, 2023
fit classifier naives bayes Silva 138 database Technical Support feature-classifier , silva	6	274	November 23, 2023