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Determine if a microbial community is predictive of another
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2
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61
|
July 30, 2024
|
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Database for ITS2
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6
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92
|
July 28, 2024
|
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Alpha diversity for each phylum
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2
|
47
|
August 28, 2024
|
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polyA in several reads of 16s
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6
|
292
|
July 25, 2024
|
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Why is using rarefaction curves to help determine sampling depth prior to producing core diversity metrics not considered p-hacking/data-peeking?
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5
|
276
|
July 24, 2024
|
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multiple sequences assigned to same organism, copy number issue or best guess?
|
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5
|
230
|
July 23, 2024
|
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Taxonomic Data: Using 18S-Nemabase in Qiime2 instead of Silva?
|
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18
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844
|
July 23, 2024
|
|
fungal ITS analysis with QIIME2: current recommended workflow?
|
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7
|
1192
|
August 22, 2024
|
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How to Sort Out Differences Between 16S rRNA Gene Sequence Databases
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1
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78
|
July 21, 2024
|
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About PICRUST2 database for training rep-seq
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2
|
77
|
July 19, 2024
|
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Automatically predicting trimming parameters.
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9
|
260
|
July 13, 2024
|
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Standard vs compositional approach for abundance
|
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3
|
128
|
July 12, 2024
|
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Duplicates causing issues, how to handle merging and clustering?
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2
|
81
|
July 10, 2024
|
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ASV vs OTU for fungal ITS
|
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8
|
913
|
July 9, 2024
|
|
combine technical replicates 2 out of 3
|
|
1
|
57
|
July 9, 2024
|
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de-novo variant calling at 0.5% on Nanopore data
|
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3
|
86
|
July 7, 2024
|
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ANCOM-BC2 and continuous variables
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4
|
173
|
July 2, 2024
|
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alpha correlation and adjusted p-value
|
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7
|
237
|
July 2, 2024
|
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When processing Pacbio full-length 16S data, the number of sequences generated in the OTU table or ASV table is too small
|
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1
|
119
|
July 1, 2024
|
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Potential artifacts produced with DADA2 wrapped in qiime2-2018.8 - need advice
|
|
7
|
1122
|
June 29, 2024
|
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how can I do so that I can compare the diversity of different group
|
|
8
|
114
|
July 29, 2024
|
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Is it possible to progress further if you don't know the primers of the dataset?
|
|
1
|
71
|
June 20, 2024
|
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Sequence and taxonomy file for GG2
|
|
8
|
179
|
June 15, 2024
|
|
Combining 16S amplicon data from various regions.
|
|
6
|
355
|
June 14, 2024
|
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Greengenes 2 confidence threshold
|
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4
|
190
|
June 13, 2024
|
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PERMANOVA multivariate model with covariates that do not exhibit homogeneity in dispersion?
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|
1
|
183
|
June 13, 2024
|
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Seeking Advice on Primer and Adapter Trimming for MiSeq Amplicon Sequencing Data Using Cutadapt
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0
|
127
|
June 4, 2024
|
|
Merging species derived from spiked species
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|
0
|
96
|
June 3, 2024
|
|
Microbiome Taxa Analysis for two factor interaction
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|
2
|
107
|
June 12, 2024
|
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Cage effect ANOVA
|
|
3
|
171
|
June 12, 2024
|
