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draft tutorial for shotgun metagenomics with QIIME 2
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9
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6314
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May 1, 2024
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Q2-ghost-tree Plugin: Community Tutorial for Creating Hybrid-Gene Phylogenetic Trees
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4
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5233
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April 24, 2024
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Recommendations for installing older versions of QIIME 2
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2
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6805
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March 31, 2024
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Automatic Manifest Maker in Python3
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3
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2195
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January 26, 2024
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q2-amr: A Plugin for Antibiotic Resistance Gene Analysis in Qiime2
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0
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410
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January 23, 2024
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Building a COI database from NCBI references
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3
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9705
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December 30, 2023
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Evident: Effect size and power calculations for microbiome community data
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9
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1940
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December 19, 2023
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Querying for public microbiome data in Qiita using redbiom
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14
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7367
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December 14, 2023
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Importing Kraken2 and bracken databases into qiime2!
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0
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1431
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November 22, 2023
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Using RESCRIPt's 'extract-seq-segments' to extract reference sequences without PCR primer pairs.
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7
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6284
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November 14, 2023
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q2-gcn-norm: plugin for normalizing sequences by 16S rRNA gene copy number
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11
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2602
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October 11, 2023
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Moving Pictures Python API tutorial (QIIME2 2018.4)
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1
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2725
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August 18, 2023
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Demultiplexing and Trimming Adapters from Reads with q2-cutadapt
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19
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50720
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June 1, 2023
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q2-krona: Plugin for creating Krona plots
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28
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5451
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May 26, 2023
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q2-SCRuB release
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0
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743
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May 26, 2023
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webapp to run analysis pipeline (italian language)
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8
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376
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May 12, 2023
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Alpha and Beta Diversity Explanations and Commands
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16
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89189
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April 17, 2023
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Working with plants? Try "PLANiTS": a plant ITS reference database for QIIME2
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6
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2255
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April 3, 2023
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Importing sequence data with lower-case nucleotide characters. Constructing an RDP classifier as an example.
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1
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1537
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March 28, 2023
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q2-mOTUs beta release :tada:
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4
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932
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March 22, 2023
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q2-repeat-rarefy: QIIME2 plugin for generating the average rarefied table for library size normalization using repeated rarefaction
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1
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1881
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March 22, 2023
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Mitohelper: a Python-based mitochondrial reference sequence analysis tool for fish eDNA studies
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4
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898
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March 16, 2023
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MiFish database from nucleotide.
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4
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1394
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March 15, 2023
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Ribosomal Database Project V16 99% OTUs and Taxonomy
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4
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526
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February 24, 2023
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Robust Aitchison PCA Beta Diversity with DEICODE
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14
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14842
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January 11, 2023
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q2-SCNIC: A tool for making correlation networks, finding modules of observations and summarizing them
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28
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17487
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January 11, 2022
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analyzing 454 data in QIIME 2
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0
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1383
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December 19, 2022
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q2-hitac: a plugin for taxonomic classification of fungal ITS sequences
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0
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370
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December 15, 2022
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q2-fondue: Plugin for (meta)data retrieval from SRA
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1
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1333
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December 12, 2022
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Visualizing 'omic feature rankings and log-ratios with q2-qurro
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1
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1384
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October 19, 2022
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